Gene Plav_3634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3634 
Symbol 
ID5453787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3891445 
End bp3892311 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID640879218 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001414889 
Protein GI154254065 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.75394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.000398592 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATGGTT CTGGCGGAGA GAAGGCGGGC GAAGGCGCAT TGGTGCTGAC AGGGCCGCTG 
ATGAAGGGCC GGCGCGGCCT TATCATGGGT GTGGCGAACG ATCACTCGAT CGCCTGGGGC
ATTGCGCGGG CGCTGGCGGC ACATGGCGCG GAACTCGCCT TCACCTATCA GGGCGAAAGC
TTCGGACGGC GCGTGAAGCC GCTGGCGGCA TCCGCCGGCT CGAAGCTGCT GCTGCCTTGC
GACGTGACGG ACCCGGCGAG CCTCGATGCG GCTTTCGAGA CGCTGGAGAA GGAATGGGGC
GTGCTCGACT TCGTGGTTCA CGCCATCGCG CATTCCGACA AGAACGAGCT CAAGGGCCGC
TATGTCGACA CGACGCGGGA AAACTTCCTG CGCACGATGG ATATTTCCTG CTTCTCCTTC
ACCGATGTGG CGCGGCGCGC GGCAAAGCTG ATGACGCGGG GCGGCTCGAT GGTGACGCTG
ACCTATGGCG GCTCGACGCG CGTCATGCCG AACTACAATG TGATGGGCGT GGCGAAGGCC
GCGCTCGAGG CGAGCGTGCG CTATCTCGCG GTCGATCTCG GCCGGCACGG CATTCGCGTC
AACGCGATTT CGGCAGGTCC GATGCGCACA CTTGCGGGCT CGGCGGTCGG CGATGCGCGG
TTCGTGTTCA AGTGGAACAA GACACATGCG CCGATCAAGG AATCGATCGA GCTCGACCAT
GTGGGCGGCG CCGGGCTTTA CCTGCTCTCC GATCTTTCGG CGCGGGTTTC CGGCGAGGTG
CATCATGTCG ATGGCGGCTA CAACATCATC GGATTGCCGC GCGCGGAAGA GCTGAAGGCG
AGCCAGCCGG AGGGCGGCGA GGGCTGA
 
Protein sequence
MHGSGGEKAG EGALVLTGPL MKGRRGLIMG VANDHSIAWG IARALAAHGA ELAFTYQGES 
FGRRVKPLAA SAGSKLLLPC DVTDPASLDA AFETLEKEWG VLDFVVHAIA HSDKNELKGR
YVDTTRENFL RTMDISCFSF TDVARRAAKL MTRGGSMVTL TYGGSTRVMP NYNVMGVAKA
ALEASVRYLA VDLGRHGIRV NAISAGPMRT LAGSAVGDAR FVFKWNKTHA PIKESIELDH
VGGAGLYLLS DLSARVSGEV HHVDGGYNII GLPRAEELKA SQPEGGEG