Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3634 |
Symbol | |
ID | 5453787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3891445 |
End bp | 3892311 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879218 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001414889 |
Protein GI | 154254065 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.75394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.000398592 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATGGTT CTGGCGGAGA GAAGGCGGGC GAAGGCGCAT TGGTGCTGAC AGGGCCGCTG ATGAAGGGCC GGCGCGGCCT TATCATGGGT GTGGCGAACG ATCACTCGAT CGCCTGGGGC ATTGCGCGGG CGCTGGCGGC ACATGGCGCG GAACTCGCCT TCACCTATCA GGGCGAAAGC TTCGGACGGC GCGTGAAGCC GCTGGCGGCA TCCGCCGGCT CGAAGCTGCT GCTGCCTTGC GACGTGACGG ACCCGGCGAG CCTCGATGCG GCTTTCGAGA CGCTGGAGAA GGAATGGGGC GTGCTCGACT TCGTGGTTCA CGCCATCGCG CATTCCGACA AGAACGAGCT CAAGGGCCGC TATGTCGACA CGACGCGGGA AAACTTCCTG CGCACGATGG ATATTTCCTG CTTCTCCTTC ACCGATGTGG CGCGGCGCGC GGCAAAGCTG ATGACGCGGG GCGGCTCGAT GGTGACGCTG ACCTATGGCG GCTCGACGCG CGTCATGCCG AACTACAATG TGATGGGCGT GGCGAAGGCC GCGCTCGAGG CGAGCGTGCG CTATCTCGCG GTCGATCTCG GCCGGCACGG CATTCGCGTC AACGCGATTT CGGCAGGTCC GATGCGCACA CTTGCGGGCT CGGCGGTCGG CGATGCGCGG TTCGTGTTCA AGTGGAACAA GACACATGCG CCGATCAAGG AATCGATCGA GCTCGACCAT GTGGGCGGCG CCGGGCTTTA CCTGCTCTCC GATCTTTCGG CGCGGGTTTC CGGCGAGGTG CATCATGTCG ATGGCGGCTA CAACATCATC GGATTGCCGC GCGCGGAAGA GCTGAAGGCG AGCCAGCCGG AGGGCGGCGA GGGCTGA
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Protein sequence | MHGSGGEKAG EGALVLTGPL MKGRRGLIMG VANDHSIAWG IARALAAHGA ELAFTYQGES FGRRVKPLAA SAGSKLLLPC DVTDPASLDA AFETLEKEWG VLDFVVHAIA HSDKNELKGR YVDTTRENFL RTMDISCFSF TDVARRAAKL MTRGGSMVTL TYGGSTRVMP NYNVMGVAKA ALEASVRYLA VDLGRHGIRV NAISAGPMRT LAGSAVGDAR FVFKWNKTHA PIKESIELDH VGGAGLYLLS DLSARVSGEV HHVDGGYNII GLPRAEELKA SQPEGGEG
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