| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3623 |
|---|
| Symbol | |
|---|
| ID | 5456858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3878862 |
|---|
| End bp | 3880031 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640879207 |
|---|
| Product | S-adenosylmethionine synthetase |
|---|
| Protein accession | YP_001414878 |
|---|
| Protein GI | 154254054 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0192] S-adenosylmethionine synthetase |
|---|
| TIGRFAM ID | [TIGR01034] S-adenosylmethionine synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAGGT CAAATTTCCT GTTCACCAGC GAATCCGTTT CAGAGGGCCA CCCCGATAAG
GTGTGCGACA GGATTTCCGA CGCCGTCGTC GATCTCTATC TGGCGGCCGA TCCTTTTGCC
CGCGTCGCCT GCGAAACGCT GACAACCACG AACAAGATCG TGCTCGCCGG CGAAGTGCGC
GGCCCCGCCT CCATCACCAA GGAGAAGGTC GAGGAAACGG CGCGCAACGC CGTCAAGGCA
ATCGGCTACG AACAGGAAGG CTTCCACTGG AAGAATGCCG ATGTCGAGGT GCTGCTGCAT
GCCCAGTCCG CCGACATCGC ACAGGGCGTT GATGCCGCCG GCAACAAGGA TGAAGGCGCT
GGCGACCAGG GCATCATGTT CGGCTATGCC TGCACCGAGA CGGATGTGCT CATGCCGTCG
CCGATCTATT ACGCCCATCG CATCCTGAAA CGCATGGCCG AGGATCGTCA TTCGGGCAAG
CGTCCCGAGT TCGAGCCGGA TGCCAAGAGT CAGGTGACGA TGAAATATGA AAACGGCAAG
CCGGTCGGCG TGACCTCGGT TGTCGTTTCG ACGCAGCACA AGGCGAATGT TTCGCAGGCA
GATCTCCGCG AACTCGTCCG CGACGCCGTG AAGAGCGTTC TGCCCAATGG CTGGTTCCCG
CCGGAAGAAG AATTCTACGT GAACCCCACC GGCAACTTCG TGATCGGCGG CCCGGACGGC
GACGCCGGCC TCACCGGCCG CAAGATCATC GTCGACACCT ATGGTGGCTG GGCGCCGCAT
GGCGGCGGTG CCTTCTCCGG CAAGGATCCG ACGAAGGTCG ACCGTTCGGC GGCTTACGCA
TCGCGTTACC TCGCGAAAAA CGTTGTGGCC GCAGGCCTTT CCGAGCGCTG CACCATTCAG
CTTTCCTATG CGATTGGTGT CTCGAAGCCG CTTTCGATCT ATTGCGATCT GCACGGCACG
GGCAAGGTCG AGGAAGATGC GATCGAGAAG GCTGTCGCGA AATGCATGGA TCTCAGCCCG
CGTGGTATCC GCGAGCATCT TCAGCTCAAC CGGCCGATCT ATGAGCGCAC GGCCGCTTAC
GGTCATTTCG GCCGCGTGCC GGAATCGGAT GGCGGTTTCT CCTGGGAGAA GACCGACCTC
GCGGACAAGC TCAAGGCGGA AATCCGCTAA
|
|---|
| Protein sequence | MARSNFLFTS ESVSEGHPDK VCDRISDAVV DLYLAADPFA RVACETLTTT NKIVLAGEVR
GPASITKEKV EETARNAVKA IGYEQEGFHW KNADVEVLLH AQSADIAQGV DAAGNKDEGA
GDQGIMFGYA CTETDVLMPS PIYYAHRILK RMAEDRHSGK RPEFEPDAKS QVTMKYENGK
PVGVTSVVVS TQHKANVSQA DLRELVRDAV KSVLPNGWFP PEEEFYVNPT GNFVIGGPDG
DAGLTGRKII VDTYGGWAPH GGGAFSGKDP TKVDRSAAYA SRYLAKNVVA AGLSERCTIQ
LSYAIGVSKP LSIYCDLHGT GKVEEDAIEK AVAKCMDLSP RGIREHLQLN RPIYERTAAY
GHFGRVPESD GGFSWEKTDL ADKLKAEIR
|
|---|
| |