| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3617 |
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| Symbol | |
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| ID | 5454919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3872381 |
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| End bp | 3873784 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640879201 |
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| Product | RNA modification protein |
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| Protein accession | YP_001414872 |
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| Protein GI | 154254048 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAG CGGGCCCCGA GGCCGAGCCC GGCTCGCCGC GCAAAAAAAT CTTCGTCAAG
ACTTATGGAT GCCAGATGAA TGTCTATGAC TCGGCCCGCA TGGTCGATGT CATGGCCCCC
TCCGGCTATA CCGAGGTCGA CGCGCCAGAA GACGCCGATA TCGTCATTCT GAATACCTGC
CACATCCGCG AAAAGGCGGC GGAAAAGGTC TATTCGGAAC TCGGCCGTCT GCGCGAGCTG
AAGAAGGAAA AGTCCGGTCG CGGCGAGGAG CTGCTGATCG GCGTGGCCGG CTGCGTCGCG
CAAGCCGAGG GCGAGGAAAT GCGCCGCCGC GCGCCTGTGG TCGATCTGGT GCTCGGCCCG
CAGACCTATC ATCGTCTGCC GGAATATGTC GCGCGCCTTG CGAATGGCGG TCCCGGTATC
GTCGAGACCG AATTTCCGGT GGACGACAAG TTCGCCAGCC TTCCCATGGC CGAAAAGCGC
AAGACGCTCG CACGCGGCGC AACCGCCTTC CTCACCATTC AGGAAGGCTG CGACAAGTTC
TGCACCTTCT GCGTCGTGCC CTATACGCGC GGCAGCGAGT TCTCGCGTCC CGTCGCGCGC
ATCCTCGATG AAGCCCGTTC GCTGGTCGAT GCGGGCGTGC GCGAGATCAC GCTGCTCGGC
CAGAACGTCA ATGCCTGGCA CGGCGAGGAT CAGGCGGGGC GTCCCGCGAC GCTCGGCTAC
CTCATTCGTG CGCTTGCGGA AATCGAAGGT CTCGCGCGGC TTCGCTACAC GACGAGCCAT
CCCCGCGACA TGGATGAAGA GCTGATTGCC GCCCATCGCG ACGTGCCGGC GCTGATGCCC
TACCTGCATC TGCCCGTCCA GTCGGGATCG GACCGTATCC TTGCCGCGAT GAACCGCCGT
CACGATGCGG ATAGCTACCA TCGCATCATC GGCCGCATCC GCGCCGCGAA GCCGGACATC
GCCCTCTCAT CCGATTTCAT CGTCGGCTTT CCCGGCGAGA CGGAAGCGGA TTTCGAGGCG
ACGCTCGATC TCATCCGCAC CGTCGGCTTC GCGCAGGCCT ACAGTTTCAA ATACAGCCCC
CGTCCCGGCA CGCCCGCCGC GACCGAGGAA GATCAGGTTC CCGAGGAAGT GAAGAGCGAG
CGCCTGCAGC GTCTTCAGGC CCTTCTCGGC GAACAGCAGC TTGCCTTCAA TGCGGGATGC
GCCGGCCGCA CCATGCCGGT CCTTTTCGAC CGGCGGGGCC GTGGCGAAAG CCAGCTTGTC
GGCCGCAGTC CCTATCTTCA GTCGGTACAT ATCGACGATG CCCCGGAACA TCTCTTCGGC
AGCCTTGTTG ATGTTGTGAT CGAGGAAGGA CATCGAAACA GCCTGCGAGG GCGTCTCCGC
GAGGAAGCGG CCGTTCTCGC CTGA
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| Protein sequence | MPEAGPEAEP GSPRKKIFVK TYGCQMNVYD SARMVDVMAP SGYTEVDAPE DADIVILNTC
HIREKAAEKV YSELGRLREL KKEKSGRGEE LLIGVAGCVA QAEGEEMRRR APVVDLVLGP
QTYHRLPEYV ARLANGGPGI VETEFPVDDK FASLPMAEKR KTLARGATAF LTIQEGCDKF
CTFCVVPYTR GSEFSRPVAR ILDEARSLVD AGVREITLLG QNVNAWHGED QAGRPATLGY
LIRALAEIEG LARLRYTTSH PRDMDEELIA AHRDVPALMP YLHLPVQSGS DRILAAMNRR
HDADSYHRII GRIRAAKPDI ALSSDFIVGF PGETEADFEA TLDLIRTVGF AQAYSFKYSP
RPGTPAATEE DQVPEEVKSE RLQRLQALLG EQQLAFNAGC AGRTMPVLFD RRGRGESQLV
GRSPYLQSVH IDDAPEHLFG SLVDVVIEEG HRNSLRGRLR EEAAVLA
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