| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3613 |
|---|
| Symbol | |
|---|
| ID | 5456234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3869564 |
|---|
| End bp | 3870256 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640879197 |
|---|
| Product | peptidase M22 glycoprotease |
|---|
| Protein accession | YP_001414868 |
|---|
| Protein GI | 154254044 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGGTCC TCGCCCTCGA TACCGCGCAA GGTGCGCTCT CCGCCGCCAT CCGCGACGGC
GAGGGCGAAC TGGCGTCGAT CTTCGAGCTG CGGACGCGCG GTCATGCCGA GGCGTTGCTC
CCCGCCCTTG AAACCCTCAT GGCCGAAGCC GCGCTCGGCT TTTCCGATCT CGACGCCTTG
GCGGTCACTG TCGGCCCCGG CACCTTTACA GGTCTTCGCG TCGGCCTCGC CGCCGCGCGC
GGCCTGGCGC TTGCGCTCGG CCTTCCCCTC GTCGGCGTGA CGACGCTGGA AGCGATCGCC
GAGCCGGCCG AAGCGAAGCC GGAGGAAATC ATCGTCTCCT CCTTCGATGC CCGGCGAAAC
GAGGTCTATC TGCAGGCCTT TTCCTCCCTG CACGTATCGC TCGCCGGTCC GCAACTGGTG
GGTCTCGATG ATGTGGCGGC GCATCTTCCC GCCGGTCCGC TCGTCCTGGT CGGCACGGGC
GCGCAACTTC TTGCCGAGTG CCTGAAGGGC CGCGCCGGCC TTCGTCTTTC GGATGCGAGG
CCGCAGCCGG ATGCGGCCGC GGTCGCGCGC ATCGCCATGG CGCGGCTGGA GGCAGAGGGC
CTGGAAGCCT TCCGCACGGC GCCGCATCCG CTTTATCTCC GTGCGCCCGA TGCCAAACTG
CCCGGCGGGA TCGACCCGGG TGCGGCAGCG TGA
|
|---|
| Protein sequence | MLVLALDTAQ GALSAAIRDG EGELASIFEL RTRGHAEALL PALETLMAEA ALGFSDLDAL
AVTVGPGTFT GLRVGLAAAR GLALALGLPL VGVTTLEAIA EPAEAKPEEI IVSSFDARRN
EVYLQAFSSL HVSLAGPQLV GLDDVAAHLP AGPLVLVGTG AQLLAECLKG RAGLRLSDAR
PQPDAAAVAR IAMARLEAEG LEAFRTAPHP LYLRAPDAKL PGGIDPGAAA
|
|---|
| |