Gene Plav_3611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3611 
Symbol 
ID5454118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3868245 
End bp3868850 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID640879195 
Productscaffold protein Nfu/NifU 
Protein accessionYP_001414866 
Protein GI154254042 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGACA GCCCGCTAAA CCACCCCTCT CACAAGGGTT TTGTCATGTT CATCCAGACC 
GAGGCGACGC CGAATCCGGC GACCCTGAAA TTTCTGCCCG GACGCGAAGT TCTGGGTGAA
GGGCGCGCCG CCGATTTTCC GACAGCGGAA GCCGCCGCGC GTTCGCCGCT CGCTATGCGC
CTCTTTGCAG TCGAGAACGT GACGGGTGTT TTTTTCGGCT CGGACTTCAT CACCGTCACC
AAGTCGGGTG GCGAGTGGCA GCATCTGAAG CCGGCCCTTC TCGGCGCGAT CATGGAGCAC
TTCACCGGCG GCGCGCCGAT CCTTTTCTCC GCCGCGCCAG ATGATGACGA TGCCCATGCC
GCGCATGAGG GCGAAGACGG CGAGATCGTT ACCCAGATCA AGGAAATACT CGATACCCGC
GTCCGCCCTG CCGTCGCGCA GGATGGCGGC GACATCACGT TTCAGGGCTA CGAGGAAGGC
GTCGTCTTTC TCAACATGCA AGGCGCCTGC GCCGGTTGTC CTTCTTCCAC CGTCACCTTG
AAGCGTGGCG TGGAGAACAT GCTGAAGCAT TACATTCCCG AGATCGTCGA GGTCCGCCAG
GTCTGA
 
Protein sequence
MRDSPLNHPS HKGFVMFIQT EATPNPATLK FLPGREVLGE GRAADFPTAE AAARSPLAMR 
LFAVENVTGV FFGSDFITVT KSGGEWQHLK PALLGAIMEH FTGGAPILFS AAPDDDDAHA
AHEGEDGEIV TQIKEILDTR VRPAVAQDGG DITFQGYEEG VVFLNMQGAC AGCPSSTVTL
KRGVENMLKH YIPEIVEVRQ V