| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3596 |
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| Symbol | |
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| ID | 5453611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3843926 |
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| End bp | 3845362 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640879180 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001414851 |
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| Protein GI | 154254027 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.597959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGC TGACACGCGC TCGTGGCTGG GCGGCTGGCC TCGCCATCTA TGCCGAAGCC
CGCATGATCA TCATGCTGCT GCTCGGCTTC TCGGCCGGTC TTCCCTTCCT CCTCGTCTTC
TCCACCCTGT CGGCCTGGCT GCGCGAAGCC GGCATCTCGC GCACCGATAT CGGCTTGATG
AGCTATGTCG GCCTCGCCTA CACGATCAAG TTCCTCTGGG CGCCGGTGCT CGATCACCTG
CGCCTGCCGC TGCTCGACCG GCTGCTCGGC AAGCGCCGCG CCTGGATGGT GCTGGCCCAG
CTTGTCGCCG CCGCCGCTCT TGCCGGTCTG TCCTTCTCCG ATCCCTCCAC CTCGCTCACG
CCGGTGGTGC TCTTCGCCCT CGTCCTCGCC TTCGCCTCCG CCACGCAGGA TATCGCCGTC
GATGCCTGGC GCATCGAGGC CGCGTCGGAT GAGAAGCAGG GCGCCATGGC CGCCGTCTAC
CAGCTCGGCT ACCGCATCGC GCTCATCGCC TCCGGCGCCG GCGCGCTTTA TCTCGCCGAA
GGCGTTTCGT GGAATGCGGC CTATCTGTCG ATGGCGGCGC TCATGGGCGT CGGCATCGCC
GCCGCGCTGC TCGCGCCCCG CGTTGCCGAG GCCGAGGCCC CCGTCATCGG CCAGGAAACG
GTCGATGGTT TCGTCCGCCA CTTCCATGTC GGCGGCCGCC CCGCCCTCGT CATCGCCTGG
CTCTACCGTG CCGTCGTCGC CCCCTTCGTG GATTTCTTCC AGCGTTACGG CTGGTGGGCG
CTCGTCCTCC TCGCCTTGAT CGGCCTCTAC CGCGTGCCCG ATTTCGTCAT GGGCGTCATG
GCGAACCCGC TCTATATCGA CCTCGGCTTC CCGCTCTCGA CCATCGCCAC CGTGGTCAAG
CTCTACGGCA TCTGGATGAC GATCGCGGGC GCCCTGATCG GCGGCATCGT CGCCGCGCGG
ATCGGCGTCC TGCGCTCGCT TCTCGCGGGC GCCGTCGCCG CCACCGGCAC CAATCTCATC
TTTGTCTGGC TCACCTTCCG GGGTGCCGAT CCCGCCGCCC TCGCCGTCAC CATCTCGATC
GAGAATTTCT CGGGCGGCTT CGCGGGCACC TGCCTCATCG CCTATATGTC GAGCCTCGTG
AACCATGATT TCGCGGCCAC GCAATATGCG CTTTTCAGCT CTGCCTTCGC CCTGCCGGGC
AAGATCCTTG GCGGCCTTTC CGGCGTCATG GTGGACGGCT TTTCCGCCAC CGCCTCATTC
ACCCTGCCGC TGATCGGTAT GGCCCCGCAC CTGACCGCCA AGACCGCCGG CTATATTCCG
TTCTTCATCA CCACGGCCCT TATGGGCCTG CCAGCCATTC TCCTCATCCT CGTGGTCATG
CGTTTCCAGC CGGCGCCCCG CCCGCCCCGG GGGCACGCCC CGGCCACGCC GGAATAA
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| Protein sequence | MTMLTRARGW AAGLAIYAEA RMIIMLLLGF SAGLPFLLVF STLSAWLREA GISRTDIGLM
SYVGLAYTIK FLWAPVLDHL RLPLLDRLLG KRRAWMVLAQ LVAAAALAGL SFSDPSTSLT
PVVLFALVLA FASATQDIAV DAWRIEAASD EKQGAMAAVY QLGYRIALIA SGAGALYLAE
GVSWNAAYLS MAALMGVGIA AALLAPRVAE AEAPVIGQET VDGFVRHFHV GGRPALVIAW
LYRAVVAPFV DFFQRYGWWA LVLLALIGLY RVPDFVMGVM ANPLYIDLGF PLSTIATVVK
LYGIWMTIAG ALIGGIVAAR IGVLRSLLAG AVAATGTNLI FVWLTFRGAD PAALAVTISI
ENFSGGFAGT CLIAYMSSLV NHDFAATQYA LFSSAFALPG KILGGLSGVM VDGFSATASF
TLPLIGMAPH LTAKTAGYIP FFITTALMGL PAILLILVVM RFQPAPRPPR GHAPATPE
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