| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3573 |
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| Symbol | |
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| ID | 5457030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3820464 |
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| End bp | 3821621 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879157 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001414828 |
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| Protein GI | 154254004 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.856531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGC GCGATTTCTA TGACGTGCTC GGGGTGAGCC GCAACGCGAG CGCGGACGAG
CTGAAAAAGG CTTACCGCAG CCTCGCCAAG AAATATCACC CCGACCAGAA CCAGGGCGAC
AAGGAAGCCG AGCAGCGCTT CAAGGAGCTC AACGAAGCCT ATGACGCGCT GAAGGACGAG
CAGAGCCGCG CGGCCTACGA CCAGTTCGGC CACGCTGCCT TCGATGGCGG CATGGGTGCG
CGCGGCGGGC CGGGCGGCAT GGGCGGCTTC GGCGCCGGCG CCTCGATGTC CGACATATTC
GACGATCTCT TCGGCGAATT CATGGGCGGG CGAGGCGGCC GCGGCGGACG GAGAGGCGAT
GGCGGCCAGA CGCGCGGCCA CGATCTCCGC TACAATATGG AAATCAGCCT GGAGGAGGCC
TTCGAGGGCA AGAAGGCGCA AGTTCGCGTT CCCGGCTCCG TCGCATGCGA AGTATGCACC
GGTACGGGCG CGGCGCCGGG ATCGAGCCCG ATTACCTGCC CGACCTGTCA GGGGCATGGC
AAGGTCCGCG CCTCTCAAGG CTTCTTCACG ATCGAAAGGA CCTGCCCGAC CTGTCACGGC
CGCGGCCAGA CGATCGACAA GCCCTGTACC AATTGCCATG GCGCAGGCCG CGTCGAGAAG
GAGCGCACGC TCTCCGTCAA TATTCCGGCG GGGGTCGAGG ACGGCACCCG CATTCGCCTT
TCCGGCGAAG GCGAGGCCGG AATGCGGGGC GGCCCGGCGG GCGATCTTTA CATCTTCCTC
TCGGTCAAGC CGCATCGCCT CTTCGAACGG GACGGCGCCG ATCTTTTCTG CCGGGTGCCC
ATCGCGATGG TGACGGCGAC ACTCGGCGGC GAAATCGAAG TGCCGACGCT GGGCGGCAAG
AAGGTCAAGG TGAAGGTGCC GGAAGGCGCG CAGACCGGGC GTCAGTTCCG CCTGCGTGGA
AAGGGCATGC CTGTCGTCAA TTCCCGCGAG ACGGGCGATC TCTATATCCA GATCACCGTG
GAGACCCCGG TGAACCTGAC GAAGAAACAG AAGGAACTGC TCAAGGAGTT CGAGCAGGCA
TCCACGCCGG GGAACAACCC GGAAAGCGCC GGCTTCTTCG CCAAGGTGAA GGAGTTCTGG
GACGGCTTCC AGAACTGA
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| Protein sequence | MSKRDFYDVL GVSRNASADE LKKAYRSLAK KYHPDQNQGD KEAEQRFKEL NEAYDALKDE
QSRAAYDQFG HAAFDGGMGA RGGPGGMGGF GAGASMSDIF DDLFGEFMGG RGGRGGRRGD
GGQTRGHDLR YNMEISLEEA FEGKKAQVRV PGSVACEVCT GTGAAPGSSP ITCPTCQGHG
KVRASQGFFT IERTCPTCHG RGQTIDKPCT NCHGAGRVEK ERTLSVNIPA GVEDGTRIRL
SGEGEAGMRG GPAGDLYIFL SVKPHRLFER DGADLFCRVP IAMVTATLGG EIEVPTLGGK
KVKVKVPEGA QTGRQFRLRG KGMPVVNSRE TGDLYIQITV ETPVNLTKKQ KELLKEFEQA
STPGNNPESA GFFAKVKEFW DGFQN
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