Gene Plav_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3540 
Symbol 
ID5454381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3785052 
End bp3785501 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID640879124 
Producthypothetical protein 
Protein accessionYP_001414795 
Protein GI154253971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAC GCAAGAAGAA GGTGCCGATT TCCGTATATC TCGACCCCGA CATCATGGCG 
ACACTATCGG ACTATGCAGG CCGACGCGAA CAACCGCTCT CCCTGATCGC AGAGGCCGCC
ATCGCGTCCT TCCTGTCGCC GGACGACGCT GAGCGGCGTG AAGCCGTGGT CGCCAAACGC
CTCGATCAGA TCGATCGCCG TCTCAACCGC ATGGAGCGCG ACATCGGGAT CTCCGTCGAG
ACCATGGCCG TATTCATCCG GTTCTGGCTC AACACGACGC CGGCGCTGCC CGAGCCCGCA
GCCCAGGCAG CGCGCGCCAT GGTCGGGAAG CGCTACGAGG CGTTCATCGC GGCCCTTGGA
CGGCGCTTGG CCCAGGGACC GAAACTTCGG CAGGAGATCG TTGAAGATGT CGGCGAGTCG
CCGTCCAGCC CGACAGAGAG CGATCCATAG
 
Protein sequence
MTGRKKKVPI SVYLDPDIMA TLSDYAGRRE QPLSLIAEAA IASFLSPDDA ERREAVVAKR 
LDQIDRRLNR MERDIGISVE TMAVFIRFWL NTTPALPEPA AQAARAMVGK RYEAFIAALG
RRLAQGPKLR QEIVEDVGES PSSPTESDP