| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3487 |
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| Symbol | |
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| ID | 5454804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3733108 |
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| End bp | 3734619 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640879072 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001414743 |
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| Protein GI | 154253919 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.746658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.621078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC AGATGCAGCT GCCCTTCCCG CTTCCTTCTC AGGCGCCCGA ACCGGCGTAT
TTTCAGGATG ACGGGATGGA CGACGACAAG CTGCGCGAGG AATGCGGCGT ATTCGGCGTG
TTCGGCCATA ACGACGCGGC GGCGCTGACG GCGCTCGGCC TGCATGCCCT GCAGCATCGC
GGGCAGGAAG CGGCGGGCAT CGTCGCCTAT GACGGCGAAC ATTTTCATTC GGAGCGGCGA
CTCGGGCTTG TGGGCGACCA CTTCTCTTCC GCCAAGGTCA TCGACCGGCT GATCGGCGAC
GCGGCTATCG GCCATGTGCG CTATTCGACG ACGGGCGAGA CGATCCTGCG CAACGTGCAG
CCGCTGTTTG CCGACCTGTG GGGCGGCGGT TTTGCGGTCG CGCATAATGG CAACCTCACC
AATGCCATCA CACTCCGCAA CGAGCTGGTG CGCGACGGCG CGATCTTCCA GTCGACCTCC
GACACAGAGA CGATCCTGCA GCTTGTGGCG CGGAGCCGGA AGCCGCGCGT GGTGGAGCGC
TTCGTCGAGG CGCTGTCGCA GATACAGGGC GCCTATGCGC TGGTGGCGCT GACCAACAAG
AAGCTGATCG GCGCGCGCGA TCCGCTCGGC ATTCGGCCGC TGGTGCTGGG CAAGCTGGCG
GGGGCGCCGA TCCTCGCTTC GGAAACGGTG GCGCTGGACA TTATCGGCGC GCAATTCGTG
CGCGAGATCG AGCCCGGCGA GATCGTGGTG TGCACGAAGG AAGGGATCGA ATCCATTCGC
CCGTTCCCGC AGCAGAGGGT GCGGCCCTGC GTGTTCGAGT ACATCTATTT TGCGCGGCCC
GACAGCGTGG TCGGCGGCAA GAGCGTCTAT AATGTGCGCA AGCGGCTCGG GCAGGAACTG
GCGCGTGAAA GCGCGGTGGA AGCCGATGTC GTGATACCGG TGCCGGATTC CGGCGTGCCT
GCCGCCATCG GCTATGCGGC GGAGAGCGGC ATACCGTTCG AGCTCGGCAT CATCCGCAAC
CATTATGTGG GGCGGACCTT CATCGAGCCG ACGCAGCACA TTCGCCAGCT CGGCGTGAAG
CTCAAGCACA ATGCGAACCG CGCCATTGTG GAAGGCAAGC GCATCATTCT CGTGGACGAC
AGCGTGGTGC GCGGCACGAC CTCCATCAAG ATCGTGAAGA TGATGTATGA AGCGGGCGCG
AAGGAAGTGC ATATGCGCGT CGCCAGCCCG CCGATCACGC ATTCGGATTT CTATGGCATC
GACACGCCGG AGCGCGAACA ACTGCTCGCC TCCAATTACG ACCTCGAAGG AATGCGCGCC
TATATCGGCG TCGACAGCCT TGCCTTCATT TCGGTCGACG GCCTTTACCG CGCGATGGGT
TTCACGCATC GCGACCAGCA GAACCCGCAA CTGACCGACC ACTGCTTCAC CGGCGACTAT
CCGACACCGC TCACCGACCG CGACGGCGAG CAGCGGACGC GGCAATTGTC GCTTCTGGCG
GAAATCGCCT GA
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| Protein sequence | MSDQMQLPFP LPSQAPEPAY FQDDGMDDDK LREECGVFGV FGHNDAAALT ALGLHALQHR
GQEAAGIVAY DGEHFHSERR LGLVGDHFSS AKVIDRLIGD AAIGHVRYST TGETILRNVQ
PLFADLWGGG FAVAHNGNLT NAITLRNELV RDGAIFQSTS DTETILQLVA RSRKPRVVER
FVEALSQIQG AYALVALTNK KLIGARDPLG IRPLVLGKLA GAPILASETV ALDIIGAQFV
REIEPGEIVV CTKEGIESIR PFPQQRVRPC VFEYIYFARP DSVVGGKSVY NVRKRLGQEL
ARESAVEADV VIPVPDSGVP AAIGYAAESG IPFELGIIRN HYVGRTFIEP TQHIRQLGVK
LKHNANRAIV EGKRIILVDD SVVRGTTSIK IVKMMYEAGA KEVHMRVASP PITHSDFYGI
DTPEREQLLA SNYDLEGMRA YIGVDSLAFI SVDGLYRAMG FTHRDQQNPQ LTDHCFTGDY
PTPLTDRDGE QRTRQLSLLA EIA
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