| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3480 |
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| Symbol | |
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| ID | 5454179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3724742 |
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| End bp | 3725611 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640879065 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001414736 |
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| Protein GI | 154253912 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.420945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC TTCTCGCGGC AACGGATTTG TCGCACCGGT CGGACAAGGC GCTCGACCGG
GCAGCGCTTC TTGCAGGACA GTTCTCCGCC TCTCTCGACG TGCTGCATGT CGTCGACGAC
GATCAGCCCG CGGACATCAT CGAGCGGGAA ATGCAGCAAG TGCGCGCGCT GCTCGAGACG
CGCGCGGCGG CACTTGAAAA AGCGGCGGGC ACGGCACCGG CGATGTTCGT GGCGAAAGGC
GATCCCTTCC AGGAAATTTC CCGCGCAGGC GAGGAGAAGC ACGCCGACCT TATCGTGATG
GGCGCCCACC GCCGCCGGAT TCTCAAAGAC GTCTTCACGG GAACGACCGT CGAACGCGTC
ATCCGGACGG GCCGCCTGCC CGTTCTGGTG GCAAATTCGG AAGCGGAGGG TCCCTATCGC
AACGTCGTCG TCGCAACCGA CCTGTCCGAC GCCTCGGTCC GGGCCCTGCG CACGGCCAGG
GCGCTCGGAA TCCTCGACGG ACTCAAGGTC ACGCTCCTGC ATGCGTTTCT CCCACTGGCC
AAAGGCATGA TGGTCTATGC GAATGTCGAA CCGGACAAGA TCGCGGATTA CGTGGCGCAT
GAATCCTCGG AAGCCGGACA GGCCATCCAA ACCTTCATCG AGGGGCTCGA CCTCGCGCCG
AACGACTATG AACTGAAGTT GGAGGAAGGC GCTCCCTTCG ACGTCATCGC CAGGGCGGTG
GCGGAAAGGA AGGCCGATCT GCTCATCATC GGCACGAAGG GACTTACGGG CGCCAAGCGT
CTGCTGCTCG GCAGCGTGGC GGACGCGGTT CTCAAAAGTG TGGATTGCGA CGTGTTGGCG
GTGCCGATCG CATTGCAGGC AGGCGCATAA
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| Protein sequence | MKHLLAATDL SHRSDKALDR AALLAGQFSA SLDVLHVVDD DQPADIIERE MQQVRALLET
RAAALEKAAG TAPAMFVAKG DPFQEISRAG EEKHADLIVM GAHRRRILKD VFTGTTVERV
IRTGRLPVLV ANSEAEGPYR NVVVATDLSD ASVRALRTAR ALGILDGLKV TLLHAFLPLA
KGMMVYANVE PDKIADYVAH ESSEAGQAIQ TFIEGLDLAP NDYELKLEEG APFDVIARAV
AERKADLLII GTKGLTGAKR LLLGSVADAV LKSVDCDVLA VPIALQAGA
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