Gene Plav_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3414 
Symbol 
ID5454863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3652017 
End bp3654218 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content64% 
IMG OID640879003 
Producthypothetical protein 
Protein accessionYP_001414674 
Protein GI154253850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.41428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0672009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGCA AACAGCCGGT TGAGGTTCTG CTTCGCCCTG CGGTGGAGCT ATATACCGTC 
GCAGCGTGTG CAGGTGCCGC GTTTCTGTCC CTGGTGGCCC CGTGGTCGCT CGCACTGAGC
CCCGGCATGG GCGTCGGCAG CGCGCTGGCG TTCGGCGCCT ACGGTGCCAT CCGCTACCGC
GATGCCCGCG TGATCCTGTG CTATCGGCGC AACATCCGCC GCCTGCCGCG GTACGTGATG
ACCAGCCGCG ACGTGCCGGT CAGCCAGCAG CGGCTCTTCA TCGGTCGGGG CTTTCTCTGG
GAGCAGAAGC ACACCCATCG GCTGATGCAG ACGTACCGGC CGGAGTTTCG CCGCTACGTT
GAGCCGACAC CCGCTTATCG GCTGGCGCGG CGTCTGGAAG AACGGTTGGA GTTCGCGCCG
TTTCCGCTTT CACGCCTGCC GAGGCTCACA GGCTGGGATG TGCCTTTCAA CCCCGTTCGG
CCGTTGCCGC CCGTGGGGGG CCTGCCGCGA TTGCACGGCA TCGAGCCGGA GGAGGTGGAC
GTCAGCCTGC CGCTGGGCGA GCGCGTCGGG CATTCGCTGG TCTTGGGCAC CACCCGCGTG
GGCAAGACCC GGCTGGCCGA GTTGTTCGTG ACGCAGGACA TCCGGCGCAA GAACGCATCC
GGCGAGCATG AGGTCGTCAT CGTCATCGAC CCCAAGGGCG ATGCCGACCT CCTGAAGCGC
ATGTACGTCG AGGCCAAGCG CGTGGGCCGC GAGGGTGAGT TCTACATCTT CCATTTGGGC
TGGCCGGAAA TCAGCGCCCG CTACAACGCG GTGGGTCGCT TCGGTCGGAT CTCGGAAGTG
GCGACACGCA TCGCGGGACA GCTCTCCGGC GAAGGCAACA GCGCGGCATT CCGCGAGTTC
GCATGGCGCT TCGTCAACAT CATCGCCCGC GCCTTGGTGG AACTGGGGCA GCGCCCGGAC
TACATGCTGA TCCAGCGGCA CGTCATCAAC ATCGACGCGC TGTTCATCGA GTACGCCCAG
CACTTCTTCG CCAAGACCGA GCCCAAGGCC TGGGAGGTGA TCGTCCAGAT CGAGGCCAAG
CTCAATGAGA AGAACATCCC GCGCAACATG ATCGGGCGCG AGAAGCGCGT GGTGGCGCTG
GAGCAGTACC TTTCCCAGGC GCGCAACTAC GACCCGGTAC TCGACGGCCT GCGCTCTGCA
GTCCGCTACG ACAAGACGTA CTTCGACAAG ATCGTCGCAT CGTTGCTGCC GCTGCTGGAG
AAGCTCACCA GCGGCAAGAT CGCCCAGCTC CTGGCCCCGA ACTACTCCGA CCTGGCCGAT
CCGCGCCCGA TCTTCGATTG GATGCAAGTC ATCAGAAAGC GCGCCGTGGT CTATGTGGGC
CTGGATGCGC TCTCGGACGC TGAAGTCGCC GCAGCGGTCG GCAATTCCAT GTTCTCGGAT
CTAGTATCCG TCGCAGGGCA CATCTACAAG CACGGGATCG ATGATGGCTT ACCCGGTGCA
TCGGCAGGCA CACGCGTGCC GATCAACGTG CACGCGGACG AATTCAATGA GTTGATGGGC
GACGAGTTCA TACCGCTCAT CAACAAGGGT GGCGGCGCCG GCCTGCAAGT TACTGCGTAC
ACGCAGACGC TCTCGGACAT TGAAGCCCGC ATTGGCAACC GCGCGAAAGC CGGCCAGGTG
ATCGGCAACT TCAACAACCT GTTCATGCTC AGGGTCCGGG AGACGGCCAC CGCCGAACTG
CTGACCCGGC AATTGCCGAA GGTCGAGGTC TATACGACCA CCATCGTCTC CGGTGCGACC
GACAGTTCGG ACATCCGCGG CGCGACGGAT TTCACCAGCA ACACGCAGGA CCGTATCAGC
ATGTCCAGCG TGCCAATGAT CGAGCCCTCC CACATCGTCG GCCTGCCCAA GGGGCAGTGC
TTCGCGCTGC TGCAGGGCGG CCAACTCTGG AAAATCAGGA TGCCACTGCC GGCGCCGGAC
CCCGATGAGG CCATGCCGCA GGATCTGCAA CAACTGGCGG GCTACATGCG CCAGAGCTAC
ACCGATGCCA CCCAATGGTG GGAGTTCACC AGTTCCCCAG CCTTACAGGA TGCGGCCTTG
CCCGACGATC TGCTCGATGA CGCCGAGCTG GCCAAGCCGG TCGAGTCTGC CGCGGCGGCC
ACCGGCGCCG ACGACAGCGC CGAAAACGAG GCCTCGCCAT GA
 
Protein sequence
MSGKQPVEVL LRPAVELYTV AACAGAAFLS LVAPWSLALS PGMGVGSALA FGAYGAIRYR 
DARVILCYRR NIRRLPRYVM TSRDVPVSQQ RLFIGRGFLW EQKHTHRLMQ TYRPEFRRYV
EPTPAYRLAR RLEERLEFAP FPLSRLPRLT GWDVPFNPVR PLPPVGGLPR LHGIEPEEVD
VSLPLGERVG HSLVLGTTRV GKTRLAELFV TQDIRRKNAS GEHEVVIVID PKGDADLLKR
MYVEAKRVGR EGEFYIFHLG WPEISARYNA VGRFGRISEV ATRIAGQLSG EGNSAAFREF
AWRFVNIIAR ALVELGQRPD YMLIQRHVIN IDALFIEYAQ HFFAKTEPKA WEVIVQIEAK
LNEKNIPRNM IGREKRVVAL EQYLSQARNY DPVLDGLRSA VRYDKTYFDK IVASLLPLLE
KLTSGKIAQL LAPNYSDLAD PRPIFDWMQV IRKRAVVYVG LDALSDAEVA AAVGNSMFSD
LVSVAGHIYK HGIDDGLPGA SAGTRVPINV HADEFNELMG DEFIPLINKG GGAGLQVTAY
TQTLSDIEAR IGNRAKAGQV IGNFNNLFML RVRETATAEL LTRQLPKVEV YTTTIVSGAT
DSSDIRGATD FTSNTQDRIS MSSVPMIEPS HIVGLPKGQC FALLQGGQLW KIRMPLPAPD
PDEAMPQDLQ QLAGYMRQSY TDATQWWEFT SSPALQDAAL PDDLLDDAEL AKPVESAAAA
TGADDSAENE ASP