Gene Plav_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3390 
Symbol 
ID5455580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3628898 
End bp3631852 
Gene Length2955 bp 
Protein Length984 aa 
Translation table11 
GC content65% 
IMG OID640878979 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001414650 
Protein GI154253826 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01525] heavy metal translocating P-type ATPase
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0773629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCAT CCGGGGAAAA CCTTGTCAAT GAAGAGCGAT CTATGAACAA AGAACCTTCC 
AGCCCATGCG CCTGCTCCGG CGGCAATGGC CAACAGACGG CGTGCGCCAG TGAGCAGGCC
AGCACTGAAA CCACCGTTTT CCACGTGAGC AACATGGATT GCCGCAATGA GGAAGCACTG
GTGCGGCGAA CGCTGGAGGG CATGCCCGGT GTCGAGCGGC TCCTGTTCGA TCTTCCGCAG
CGTTTGTTGA CCATTTCGCA CCGCGAAGTC TCGGCCGATG CCTTGGAGCA AGCGCTGAAT
TCGGTGGGCA TGAAGGCTCA GGCTGTCCGA GACGCCGCCG TGTCGACCAC CTACCGCATC
GAGAACATGG ACTGCCCGAG CGAGGAGAAA CTCATCCGCT CGCACCTCGG GGCAGTCGAG
GGAATTCAGG ACCTCGACTT CGACCTCGCT GAGCGCACCC TGTCGGTGAA ACACCTCGCT
CAGGCACGCG CGCAGATGGA GCAGGTCCTG GCCTCGATCG GCATGCGCGC CAAGGAGCAG
ACCTTCGGCC ACACGGGGCC GATCGAAGCC GCGGCTGTGA TCCCATCCTC GGCCCTGCAG
CAGCAACCAA CCGCTGCCGT TTCCGCGCCG CCGATCGGCG AGCGGGTGAC GTACCGGATC
GAGAACATGG ATTGCCCGAC GGAAGAAGCG CTGATCCGCG ACCGGCTGGG CAAGCTGCCG
GGTGTGACCG CGCTCGACTT CAATCTGATG CAGCGTGTGC TGGGAGTCCA GCACACGCTG
GCGACCTCAG CGCCGATCGA GAAGGCGCTT GCTTCCATTG GAATGCAGGC TGCGCGGCAG
GACATGCAGA CAGCCACCAC GGTACTTCGC ATCGCGAAGA TGGACTGTCC GACCGAGGAA
AGTCTGATCC GCGGCAAGCT GCAAGGCATG CCGGGCGTGC AGGGAATGGA TTTCAACCTG
ATGCAGCGCA CGCTCACGGT TCGGCACACA CCCGACGCGA TCAAGCCGGC AGTCGAAGCC
ATCGAATCGC TGGGCATGGA AGCCGAGGTC CAGAGGACTG ATGAGCCGCG CGATGCCCCG
GTGGCCGCGC ACAAGACCAA TTGGTGGCCG ATGGCGGTTT CGGGCGTTGC GGCGGTGGCC
GCCGAAGGCG TGTACTGGGT CAACGACGGC AATCATTGGG CCGTGATCGT GCTGGCACTG
GTTTCGATCT TCACCGGCGG CCTCAGCACC TACAAGAAGG GCTGGATCGC GCTGAAGAAC
CTCAACCTGA ACATGAACGC CCTGATGGCC ATCGCGGTCA CCGGCGGCAT GGCGATCGGC
CACTGGCCGG AGGCCGCCAT GGTCATGTTC CTGTTCGCGT TGGCGGAAGT GATCGAGGCG
AAGTCGCTGG ACCGCGCCCG CAACGCCATT CGGGGGCTGA TGGACTTGGC GCCCGAGACC
GCGACCGTGC GGCAGGCCGA TGGCTCATGG ACAGAGCTGC CGGCCAAGGA GGTCGCAAAG
GGCGCGGTGG TCCGCGTGCG TCCTGGCGAG CGCATCGCAC TGGACGGCCT GATCACCTCG
GGTCGATCGG CCATCAACCA GGCGCCCATC ACCGGCGAGA GCCTGCCCGT CGAGAAGGCC
GAAGGTGACC AGGTCTTCGC CGGAACCATC AATGAGACCG GCTCTTTCGA ATACAAGGTG
ACCGCAGGCG CCAGCGACTC GACGCTCGCG CGCATCATCC ATGCCGTGGA GTCCGCGCAG
GGCAGCCGTG CGCCCACGCA GCGCTTCGTC GACCAGTTCG CCCGCGTCTA CACGCCGGCG
GTGTTCGCGG TGTCCGTGCT GGTTGCCGTC GTGCCGCCGC TCGCCTTCGG CGGCGCATGG
TTTGACTGGG TCTACAAGGC CCTGGTACTG CTGGTGATCG CCTGCCCCTG CGCTCTGGTC
ATCTCCACGC CGGTCACCAT CGTCAGCGGC TTGGCCGCTG CCGCCCGACG CGGCATCCTG
ATCAAGGGTG GCGTCTACCT GGAGGGCGGG CGCAAGCTCA AGGCGTTGGC CCTGGACAAG
ACCGGCACAC TCACACATGG CAAGCCCGAG CAGACCGACT TCGTGCCGCT GATCGGCGAG
GCGCAGGAAG TTGCCGCCTG GGCCGCAAGC CTCGCGGCAC GCTCGGACCA TCCTGTGTCT
CAGGCCATCG CCCGCAAGGC GAACCGTGAC GGCATCGCGC TGCACGAGGT CGACGACTTC
GCGGCGCTGC CTGGCCGCGG CGTGCGCGGC CGCGTCGCCG GGCGCATGTT GCACATGGGC
AACCACAGGC TCGCCCAGGA GCTGGGCCTG AGCGAAGCGA CGCTCCAGGC TCGGCTGGAG
ACCCTGGAGC GCCAAGGCAA GACAGCGATC CTGCTGATGG ACGATGCGAC CGTGCTCGGC
ATTTTTGCAG TGGCCGACAC CGTGAAGGAA ACCAGCCGTG AGGCGGTGGC CGACCTGCAG
GCGCTGGGTG TGCGCACGCT GATGCTGACG GGGGACAACC AGCACACGGC CGCGGCCATC
GCTGCCCAGG TCGGAATCTC TGAAGCCCGT GGTGACCAAC TGCCCGAAGA CAAGCTCAAG
ACCATCGAAA GCCTGGTCGG CGGCGAGGGC CAGGTGGGCA TGGTGGGCGA CGGCATCAAC
GATTCGCCCG CGCTCGCCCG TGCCGACATC GGCTTCGCCA TGGGCGCGGC CGGCACCGAC
ACCGCGATCG AAACAGCCGA CGTCGCCCTG ATGGACGACG ACCTGCGCAA GATCCCCGCC
TTCATCCGGC TGTCGCGTAG CACTGCGGCG ATCCTCACGC AGAACATCGT TCTGGCCCTT
GGCATCAAGG CGGTGTTCCT TGCGTTGACG TTCACAGGGC ATGCCACCAT GTGGATGGCT
GTGTTCGCTG ACATGGGGGC AAGTCTTTTG GTTGTCGTCA ATGGGCTGCG CCTCCTGAAG
TTCAAGGCGG CATGA
 
Protein sequence
MMASGENLVN EERSMNKEPS SPCACSGGNG QQTACASEQA STETTVFHVS NMDCRNEEAL 
VRRTLEGMPG VERLLFDLPQ RLLTISHREV SADALEQALN SVGMKAQAVR DAAVSTTYRI
ENMDCPSEEK LIRSHLGAVE GIQDLDFDLA ERTLSVKHLA QARAQMEQVL ASIGMRAKEQ
TFGHTGPIEA AAVIPSSALQ QQPTAAVSAP PIGERVTYRI ENMDCPTEEA LIRDRLGKLP
GVTALDFNLM QRVLGVQHTL ATSAPIEKAL ASIGMQAARQ DMQTATTVLR IAKMDCPTEE
SLIRGKLQGM PGVQGMDFNL MQRTLTVRHT PDAIKPAVEA IESLGMEAEV QRTDEPRDAP
VAAHKTNWWP MAVSGVAAVA AEGVYWVNDG NHWAVIVLAL VSIFTGGLST YKKGWIALKN
LNLNMNALMA IAVTGGMAIG HWPEAAMVMF LFALAEVIEA KSLDRARNAI RGLMDLAPET
ATVRQADGSW TELPAKEVAK GAVVRVRPGE RIALDGLITS GRSAINQAPI TGESLPVEKA
EGDQVFAGTI NETGSFEYKV TAGASDSTLA RIIHAVESAQ GSRAPTQRFV DQFARVYTPA
VFAVSVLVAV VPPLAFGGAW FDWVYKALVL LVIACPCALV ISTPVTIVSG LAAAARRGIL
IKGGVYLEGG RKLKALALDK TGTLTHGKPE QTDFVPLIGE AQEVAAWAAS LAARSDHPVS
QAIARKANRD GIALHEVDDF AALPGRGVRG RVAGRMLHMG NHRLAQELGL SEATLQARLE
TLERQGKTAI LLMDDATVLG IFAVADTVKE TSREAVADLQ ALGVRTLMLT GDNQHTAAAI
AAQVGISEAR GDQLPEDKLK TIESLVGGEG QVGMVGDGIN DSPALARADI GFAMGAAGTD
TAIETADVAL MDDDLRKIPA FIRLSRSTAA ILTQNIVLAL GIKAVFLALT FTGHATMWMA
VFADMGASLL VVVNGLRLLK FKAA