| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3371 |
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| Symbol | |
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| ID | 5456056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3612480 |
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| End bp | 3613703 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878961 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001414632 |
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| Protein GI | 154253808 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.252246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.409086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTGT TCGCGTCGGA CACGGCATCG GTAACGCTCG ACGAAGCCAT CGCCATCGCG
CTGTCGCAGA ACACGCAGGC GCGCATCGCT TTCGAGGCAA TCGGTGAACG AACCGCAGAA
GCGCGGCAAG CGGGGCTTCC GCCCAATCCC GAACTCGGCC TCGAAGTCGA GAATGTGCTC
GGCTCCGGCC TCTATCGCGG CACGGAGGAG GCGGATGTCA CGCTCGGCCT CACGCAGCGT
ATCGAAACGG GCGGCAAGCG CGAAAACAGG AAGCGTCTCT CCCGCCTTTC GGAAGCGGTC
GCCGCCGCAG AAAGAGATGT TGTGGAGCGC CGCCTGCGCG AGGCGGTAAC GCATGCCTTC
AACGGATTGC TTGCCGCACA GCAAGAAGCG GAAACGACTT CGGCCGCGGC GGAGCGGGTC
CGCGGCCTCG TGCCGGCGCT GCGTCAGCGC TTCGAACGGG GAGCTTCTTC AGAAGCCGAT
CTCAATCGCG GATTGCTCGC ACTCGATCTC GCCGAGATCA GGGCGGGGAC GAAACAGGCC
GAGTTGCGCA CGGCACAGCA AACACTGCTC GCCCTCTGGT CGGAGAGCGC CTATCGTCCG
TTACGCGCCG AGGGCGCTTT CGCCGTTCCG GCAACGCCGC TTCCCGGCCT CGACGAACTC
GAAGCCATGC TCGACAGCCA TCCGGCGGTG CTGGGCGGAC AACAGACCGT GAGTGTGCGC
CGCGCGGCCT TCGACCTGGA AAAGTCGAAT GCCTATCCGG ATGTGACGCT GGGCGCAGGC
GCCCGCCATT TCGCAGGAAC GGACGAAAGC GCGTTCCTCT TCTCCGTCTC CATTCCTATC
TCCGTCTTCG ACCGCAATCA GGGCAATATC GACGCCGCAT CGAGCCGCGT CGTGCAAGCC
GATCTCGATG CGCGGCGAAC GAGGGTGGAA CTCGCCCGCG AATTGCAACA GTCGCATCAG
ACCTACAGCA GCCGTTGCCG TGAAGCGGAG CGGCTTGGCA GATCGGTCGT CCCCACATCG
GCAAAAACAT CCGCCGCAAT CCGCGAAGGC TATCTCGCGG GCCGTTTTGG CGTACTCGAT
CTTCTCGATG CGCTGCAGAC CAGCGCCGAC AGCCGGATGC AGGAAACGGA GGCCCTTCTC
GCCTGCCGTA ATGCGCTGGC CTCCATCGAA ATTCTGACCG GCCTTTCCGG CAAGGAAGAA
GCGGCCGAAG GAGATGCACA ATGA
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| Protein sequence | MPVFASDTAS VTLDEAIAIA LSQNTQARIA FEAIGERTAE ARQAGLPPNP ELGLEVENVL
GSGLYRGTEE ADVTLGLTQR IETGGKRENR KRLSRLSEAV AAAERDVVER RLREAVTHAF
NGLLAAQQEA ETTSAAAERV RGLVPALRQR FERGASSEAD LNRGLLALDL AEIRAGTKQA
ELRTAQQTLL ALWSESAYRP LRAEGAFAVP ATPLPGLDEL EAMLDSHPAV LGGQQTVSVR
RAAFDLEKSN AYPDVTLGAG ARHFAGTDES AFLFSVSIPI SVFDRNQGNI DAASSRVVQA
DLDARRTRVE LARELQQSHQ TYSSRCREAE RLGRSVVPTS AKTSAAIREG YLAGRFGVLD
LLDALQTSAD SRMQETEALL ACRNALASIE ILTGLSGKEE AAEGDAQ
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