| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3353 |
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| Symbol | |
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| ID | 5454637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3592020 |
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| End bp | 3592799 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878943 |
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| Product | glucose-1-phosphate cytidylyltransferase |
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| Protein accession | YP_001414614 |
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| Protein GI | 154253790 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.608703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAG TTGTGATATT GGCGGGTGGC CTCGGCACCC GCATTTCGGA GGAAAGCCAG
CTCCGCCCGA AGCCCATGAT CGAAATCGGC GGCCGCCCGA TCCTGTGGCA CATCATGAAA
ATCTACACCC ATTTCGGGCA TACCGATTTC GTCATCTGCG TCGGCTATCG CGGATATATG
ATCAAGGAAT ATTTCGCCAA CTATGTCCTG CACTCGTCCG ATGTGACGAT TGATGCGGCA
AACGGCGACA TCGTCTTCCA TCAAAAGGCG CGGGAGCCGT GGCGCGTCAC GCTGGTGGAT
ACAGGCGCGG ACACATTGAC CGGCGGGCGT TTGAAGCGGG TGCGCGACTA TCTCGATCCC
GGCGAAACCT TCTTCATGAC CTATGGCGAC GGCGTCGCGA ATGTCGACAT TGACGCTCTC
CTCGCTTTCC ACAAGAAGCA CGGAAAGGAA GCAACGCTGA CCAGCGTGAT CCCGCCCGGC
CGCTACGGCG CGCTCGAGCT GGAAGGCGAT GTCGTGCAGC GTTTCATTGA AAAGCCCCCG
GGCGACAATG CCTGGATCAA TGGCGGCTTC TTCGCGCTCG AACCGTCGGT TCTCGACCGG
ATCGAAGGCG ACGCAACCCC CTTTGAGAGC GAGCCGCTGA TGGGGCTCGC GCGAGACCGG
CAGCTCATGA GCTTTCGCCA TGCCGGCTTC TGGCAGCCGA TGGACACGCT GCGTGAAAAA
AATCATCTGG AAGAACTGTG GGCCGGCGGA AACGCGCCAT GGAAGGTCTG GAGGGATTAG
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| Protein sequence | MTKVVILAGG LGTRISEESQ LRPKPMIEIG GRPILWHIMK IYTHFGHTDF VICVGYRGYM
IKEYFANYVL HSSDVTIDAA NGDIVFHQKA REPWRVTLVD TGADTLTGGR LKRVRDYLDP
GETFFMTYGD GVANVDIDAL LAFHKKHGKE ATLTSVIPPG RYGALELEGD VVQRFIEKPP
GDNAWINGGF FALEPSVLDR IEGDATPFES EPLMGLARDR QLMSFRHAGF WQPMDTLREK
NHLEELWAGG NAPWKVWRD
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