Gene Plav_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3350 
Symbol 
ID5453657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3589148 
End bp3590350 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content62% 
IMG OID640878940 
ProductC-methyltransferase 
Protein accessionYP_001414611 
Protein GI154253787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.295208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.715465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCTGA TCGACCTCGG CTCCGCTCCG CCGTCAAACG CCTATCTGAC CGCCGAAACG 
CTCAATGGTC CCGAGACCTG GTATCCGCTC CGCGTGCTCG TCTGCACCAC TTGCTGGCTG
GTCCAGACCG AAGACCATGC GGGCCGCGAA GAGTTGTTCT CCGCTGAATA CGCCTATTTC
AGCTCGACCT CGACAAGCTG GCTTGCTCAT TCAAAGGCCT ATGTCGGCGC GATGGTTGAC
CGTTTCGGCC TCGGCGCAGA CAGCATGGTC GTGGAAGTGG CCGCCAATGA TGGCTACCTG
CTTCAATATG TGAAGGAGCG CGGCATCCCC TGTTACGGCG TCGAGCCGAC GGCGAGCACC
GCCGCGGCGG CGCGGGAAAA AGGGATCGAG ATCGACGAAC GCTTTTTCGG CGTTCAGCTC
GCAACGGAAC TTGCCGCAGC CGGCAGGCAG GCGGATCTCA CGGCGGCAAA CAACGTCCTT
GCGCATGTGC CGGACATAAA TGATTTCGTA TCGGGCTTCG CCGCGCTGCT GAAGCCCTCG
GGCGTATCCA CTTTCGAATT CCCGCATCTG CTGAAGCTCG TTCAGGAAAA CCAGTTCGAC
ACGATCTACC ACGAGCACTA TTCCTACCTC TCCTTGACGG CGGTAAACCG CATCTTTGCC
GCCAATGGCC TTCGGTGCTT CGACGTGGAG GAACTGCCGA CACATGGCGG CAGCCTGCGC
GTCTATGCGC AGCGCGCCGA TAGCGGCCGG CATGAGGCCT CGCCGCGCCT CGCTGCCATG
CTTGCCCGCG AAGAAGAATG CGGCGTCGCG AGCGAGAGCT TCTATGAAGG CTTCCAGGCC
CGCGCCGGAA AAATGAAGGA CGATTTCCTC GAATTCCTGA TCGACGCAAA GCGAAAGGGA
TTGAAGGTCG GCGCCTATGG TGCGGCGGCG AAGGGAAACA CCCTCATGAA CTTCGCCGGC
ATCCGCCCCG ATCTCATCCC CTATGTCGTG GACCGCGCCG CCGCGAAGCA AGGCAAGTTC
ATGCCCGGCA GCCGCATCCC GATCGTCGGC GAAGCCCGGA TAAAACAGGA CCGCCCGGAC
GTCATCGTCA TCCTGCCCTG GAACATCCGC GAAGAGGTAA TGGCGCAGCT CGCCTATGCG
CGGGAATGGG GCGCCGTGTT CGTAACGGCC GTTCCCGAAT TGACCGTCCA GCCGGGACGA
TAG
 
Protein sequence
MSLIDLGSAP PSNAYLTAET LNGPETWYPL RVLVCTTCWL VQTEDHAGRE ELFSAEYAYF 
SSTSTSWLAH SKAYVGAMVD RFGLGADSMV VEVAANDGYL LQYVKERGIP CYGVEPTAST
AAAAREKGIE IDERFFGVQL ATELAAAGRQ ADLTAANNVL AHVPDINDFV SGFAALLKPS
GVSTFEFPHL LKLVQENQFD TIYHEHYSYL SLTAVNRIFA ANGLRCFDVE ELPTHGGSLR
VYAQRADSGR HEASPRLAAM LAREEECGVA SESFYEGFQA RAGKMKDDFL EFLIDAKRKG
LKVGAYGAAA KGNTLMNFAG IRPDLIPYVV DRAAAKQGKF MPGSRIPIVG EARIKQDRPD
VIVILPWNIR EEVMAQLAYA REWGAVFVTA VPELTVQPGR