| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3332 |
|---|
| Symbol | |
|---|
| ID | 5455408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3568639 |
|---|
| End bp | 3569283 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640878922 |
|---|
| Product | phosphoribosylglycinamide formyltransferase |
|---|
| Protein accession | YP_001414593 |
|---|
| Protein GI | 154253769 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
|---|
| TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.131556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGATCG GCATTCTCAT CTCGGGCCGG GGCTCGAACC TCAAGGCCCT GATCGACACC
TGCGCCGAAC CCGGCTTTCG CGGACGTATT GCTCTCGTCA TTTCCAATCG CCCCGGGGCG
CCTGGCCTTG CCATTGCCGA GGCGGCTGGC ATCCCGACGC TCGTCATCGA TCACAAGGAA
TATGCAAGCC GCACGACTTT CGATGCGGAA CTCGATCAGG CGCTCCGCAA GGCGGGTGTC
GAACTCATCT GCAATGCCGG GTTCATGCGC ATCCTCACGG ATGAATTCGT CGAGAAGTGG
CGCGACCGGC AGATCAACAT CCACCCCTCG ATCCTTCCCG CGTTCAAGGG CATGCATGTC
CATCAGCGCG CGCTCGACGC GGGCGTGAAG ATCACCGGCT GCACGGTCCA TTTCGTGCGC
GCCGAAATGG ATGAGGGCCC CATCGTCGCG CAGGCCGCCG TGCCGGTCCT GCCGGGCGAC
ACCGCGGAAA CGCTCGCCGC GCGCGTACTC GAAGCCGAAC ACAAGCTTTA TCCGCTGGCG
CTGCGCCTCA TTGTCGATGG CCGCGCCCGC GTCGCCGGCG AACAGGTCGT GATCGACTAT
GATGGCGAGA CACTGGCGGG GCCGTTATTC GTGCCTGCGG TTTAG
|
|---|
| Protein sequence | MRIGILISGR GSNLKALIDT CAEPGFRGRI ALVISNRPGA PGLAIAEAAG IPTLVIDHKE
YASRTTFDAE LDQALRKAGV ELICNAGFMR ILTDEFVEKW RDRQINIHPS ILPAFKGMHV
HQRALDAGVK ITGCTVHFVR AEMDEGPIVA QAAVPVLPGD TAETLAARVL EAEHKLYPLA
LRLIVDGRAR VAGEQVVIDY DGETLAGPLF VPAV
|
|---|
| |