| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3316 |
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| Symbol | |
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| ID | 5453899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3551316 |
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| End bp | 3552140 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640878906 |
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| Product | phytanoyl-CoA dioxygenase |
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| Protein accession | YP_001414577 |
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| Protein GI | 154253753 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.627312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAGA CATCACACTA CGGTGTAAAA GAGCAGACAC TTTCCGTGAC GGCCATCGAC
CGGGCGATCG AGCAGCTCAG ACTTCTTGGC TATGCCGTTC TAGACGGATC CTATAGCAGG
GCAGAACTCA CCCAACTACA GGAGGCGTTT TGCGCCGCGA GAAGGAAGAT GGAGGAGCAC
TTCGGTGGCA AAGACTCACT TGAGAAAATA GACGAACATA ACACGATCCG GATACCGATG
ATGTATGAGC GTGTCTTTCT CGATCTCGCG CTCAATCAAG CCATTATCGA GCTGTGCCGT
CGCATGATCG GAGATTACTT TATTCTCAAT CAGCAGAATG GCATATCGAA TCCAGGCAAT
TCGACGCGCT ATAATCAAGG AGCGTTTCAC CGCGATCTGC CTTACCAACA CTTTGTTTCG
GATCGGCCGC TGGCGATTAA TGCGTTGTTT TGCCTCGATG ACTTCACGAC GGAAAATGGC
GCGACCTACG TCCTGCCTGG AAGCCACAAA CAGTCCGCCT ACCCTTCAGA TGCGACGGTA
GACGCGCTCA AGGTCCAAAT TCCCGCTCCT GCCGGCAGTT TTATCATTCT CGACTGCATG
CTTTATCATT CAGGTGGGGT CAACAGGACC GATCGCGAAA GACGTGCTGT CAATCACGTC
TATTCGATCC CTATGCTCAA ACAGCAGATA GACCTGCCTG CGGCATTGGG TGACACATTC
AGCGACGATC CCGGCGTCCG TCAGCTTCTC GGTTACGACT CAACTGTCCC GCTGGATGTT
GCCGCGTACT ATAGGTCGCG TACGAAAAAG AAAGAGTTCA GCTAG
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| Protein sequence | MSETSHYGVK EQTLSVTAID RAIEQLRLLG YAVLDGSYSR AELTQLQEAF CAARRKMEEH
FGGKDSLEKI DEHNTIRIPM MYERVFLDLA LNQAIIELCR RMIGDYFILN QQNGISNPGN
STRYNQGAFH RDLPYQHFVS DRPLAINALF CLDDFTTENG ATYVLPGSHK QSAYPSDATV
DALKVQIPAP AGSFIILDCM LYHSGGVNRT DRERRAVNHV YSIPMLKQQI DLPAALGDTF
SDDPGVRQLL GYDSTVPLDV AAYYRSRTKK KEFS
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