Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3289 |
Symbol | |
ID | 5455856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3520488 |
End bp | 3520688 |
Gene Length | 201 bp |
Protein Length | 66 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640878880 |
Product | thiamine biosynthesis protein ThiS |
Protein accession | YP_001414551 |
Protein GI | 154253727 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.425824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCA CGGTGAACGG CGAATTGCGC GAGATGGACG GCCCGTTGAC GGTTCTCGGC CTCATTGAAA GCCTGCGCCT GAAACCCGGC AAGATCGCCG TCGAGCGCAA TCTCGAAATC GTGCCGCGCT CCGCCTATGG CGAAGTGGCG CTTGGCGACG GTGACCGCAT CGAGATCGTG AATTTTGTCG GCGGCGGCTG A
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Protein sequence | MKLTVNGELR EMDGPLTVLG LIESLRLKPG KIAVERNLEI VPRSAYGEVA LGDGDRIEIV NFVGGG
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