Gene Plav_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3237 
Symbol 
ID5455708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3457100 
End bp3457681 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID640878828 
Productphosphoglycerate mutase 
Protein accessionYP_001414499 
Protein GI154253675 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.879445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.545559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA TCTACATGAT CCGCCATGGC GAGGCGGCCG CCGGCTGGGA CGCCGACACA 
GATCCCGGGC TGTCGGACAA GGGCCGCGCG CAGGCAGAAG CCGTCGCCCG CGAGATCGAG
CAGCGGGTGG GGCGCAAACT CCCGATCCTC TCCTCGCCGC TGCGCCGCTG CAGGGAAACC
GCAATGCCGC TCTCCGCGCT CTGGGATTGC GAGCCGGTAA TCGAAACGCG CGTTGCGGAA
GTGCCGTCGC CCATCGACAA TCTCGCTGAA CGGGGCGCCT GGCTCCGCCG CCTCATGGCA
GGCACATGGG CGGAAGCGCT GACGCCGGAG AATACCGCCG GAGGAAAGAT CGATCTCCTC
GGCTGGCGCC GCTCCGTCGT CGAAGCGCTG ACGGAGCTGC GGGACGACAC GGTCATTTTT
TCCCACTTCA TCGCCATCAA CGTCGCCGCA GGCGCCGCGC TCGATGACGA CCGCCTCATC
TCCTTCCGTC CCGACAATTG CTCGGTGACG GTCTTCGAGA CATCGAACGG AAATCTAAAA
ATGGCGGAAC AGGGCAGGGA AGCGGATACC AGGGTGAATT AA
 
Protein sequence
MPTIYMIRHG EAAAGWDADT DPGLSDKGRA QAEAVAREIE QRVGRKLPIL SSPLRRCRET 
AMPLSALWDC EPVIETRVAE VPSPIDNLAE RGAWLRRLMA GTWAEALTPE NTAGGKIDLL
GWRRSVVEAL TELRDDTVIF SHFIAINVAA GAALDDDRLI SFRPDNCSVT VFETSNGNLK
MAEQGREADT RVN