Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3231 |
Symbol | clpX |
ID | 5455069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3449102 |
End bp | 3450367 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640878821 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001414493 |
Protein GI | 154253669 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.911182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGG TGAGCGGCGG CGACTCCAAG AACACGCTCT ACTGTTCCTT TTGCGGCAAA AGCCAGCATG AGGTGCGGAA GCTGATCGCG GGACCGACCG TCTTTATCTG TGACGAATGC GTCGAACTCT GCATGGACAT CATCCGCGAG GAGAACAAGA GCTCGCTGGT GAAGTCGCGT GACGGTGTTC CCTCGCCGCA GGAAATCTGT GGAGTGTTGG ACGATTACGT GATTGGGCAG CAGCACGCGA AGCGCGTGCT GTCGGTCGCC GTTCACAACC ACTACAAGCG CCTCAACCAC GCTGCAAAAA ACAACGACGT CGAACTTGCC AAGTCCAACA TCCTGCTGAT CGGCCCGACC GGTTGCGGCA AGACACTGCT CGCGCAGACG CTTGCCCGTA TCCTGGACGT TCCCTTTACG ATGGCGGATG CGACGACGCT GACGGAAGCC GGCTATGTCG GTGAGGACGT TGAAAACATC ATTCTGAAGC TGCTGCAATC GGCCGACTAC AATGTCGAGC GCGCGCAGCG TGGCATCGTT TATATCGACG AAGTCGACAA GATCAGCCGC AAGTCCGATA ACCCGTCCAT CACGCGTGAC GTGTCAGGCG AGGGTGTCCA GCAGGCGCTG TTGAAGATCA TGGAAGGCAC TGTGGCTTCC GTGCCGCCGC AGGGCGGACG AAAGCATCCG CAGCAGGAAT TCCTGCAGGT CGACACGACG AACATCCTGT TCATCTGCGG CGGCGCCTTT GCGGGCCTTG AAAAGATCAT CGGTCAGCGC GGCAAGGGCG CAGGCATCGG TTTCGGTGCA AAAGTGCAGT CGGTCGAAGA CCGGCGTACC GGCGACATTC TGAAGGACCT GGAGCCGGAA GATCTGTTGA AATTCGGCCT CATCCCCGAA TTCGTTGGCC GTATGCCGGT GCTCGCGACG CTGGAAGATC TCGATGAGGA AGCGCTGCTG ACCATTCTCA CCCAGCCCAA AAACGCGCTG GTAAAGCAGT ATGAGCGCCT TTTCGAGATG GAAAATGTGC GGCTCACCTT CTCCGAGGAA GCGCTTCGCG CAGTCTCGCG CAAGGCAATC GAGCGCAAAA CGGGTGCCCG CGGCCTCCGC TCGATCCTCG AATCGATCCT GCTCGACACG ATGTTCGAGC TGCCGACGCT CGAAGGGGTC GAGGAAGTGG TCATCAGCGC CGAAGTGGTG GAGGGCAAGG CTCGCCCGCT GTATATTTAT GCGGAGCGCC AGGGCGACGT CGGGACCGGC GCCTGA
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Protein sequence | MSKVSGGDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ENKSSLVKSR DGVPSPQEIC GVLDDYVIGQ QHAKRVLSVA VHNHYKRLNH AAKNNDVELA KSNILLIGPT GCGKTLLAQT LARILDVPFT MADATTLTEA GYVGEDVENI ILKLLQSADY NVERAQRGIV YIDEVDKISR KSDNPSITRD VSGEGVQQAL LKIMEGTVAS VPPQGGRKHP QQEFLQVDTT NILFICGGAF AGLEKIIGQR GKGAGIGFGA KVQSVEDRRT GDILKDLEPE DLLKFGLIPE FVGRMPVLAT LEDLDEEALL TILTQPKNAL VKQYERLFEM ENVRLTFSEE ALRAVSRKAI ERKTGARGLR SILESILLDT MFELPTLEGV EEVVISAEVV EGKARPLYIY AERQGDVGTG A
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