Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3228 |
Symbol | |
ID | 5455093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3444535 |
End bp | 3445818 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640878818 |
Product | major facilitator transporter |
Protein accession | YP_001414490 |
Protein GI | 154253666 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCCGCA CCCTTGCACC CGTTTTTTCC CTGTTGCTGG CTACGGCAAT CCTGCTGATC GGCAATGGCC TGCTTGGCAC GCTCATACCG ATTCGCGCCG GCATAGACGG TTTCGCCATA ACGACCGTGG GCGTGATCGG CAGCGTCTAT TTCGCGGGCT TTCTGGTCGG CTGCATGGCG ACGCCGCATG TGGTGCATCG GGCAGGACAC ATCAGAAGCT TTGCGGCCTT TTGCGGCCTC GCATCCGTCG CGCCGCTGAT TCACGCACTT TCTTCAGATC CGTTCATTTG GGGCCTCATG CGCATCCTGA CGGGTTTCTG CTTCGCGGGG CTCTACATGG TGATCGAGAG CTGGCTGAAC GAGCAGTCCA CGAATGAGAC GCGCGGGCGC TTCTTTTCCA CCTATGTGAT CGTGAACCTG TCGGCGCTGA CTGTCGGGCA GTTCATGCTC AACGCGGCGG ACCCGGGCGG CTTTGCCCTT TTCGCCGTGT GCTCGATCCT CACTTCGCTG GCGCTGGTGC CCGTAGCCCT TACAACGTCA GTGCAGCCGA TGCCCATCCA GAGCACGCGG ATCGATGTCT GGAAGCTCTA TGCACTGTCT CCCGTGGGCT TGATAGGGTC GTTCGTGGTT GGCCTTACCA ATGCACCGTT CTGGACGCTG GCGCCCCTCT ATGCGAGCGA GAGCGGCCTC GACATGAGCG GCATTTCGCT TTTCATGGCA GCGGCCATCA TCGGCGGGGC GATAGCGCAG TGGCCGATCG GGCGGCTTTC GGACCAAATG GACCGCCGGC GGGTCATAGT CGTCGTCAGC ATCGGCGCGG CACTGGGCGA GATTGCCCTG GTGATCGCTG GGAGCGGCGG CAGCGTGACG GCGGTGATGC TGGCAGGCTT CCTGTTTGGT GTGTTCGGCC TGACGCTCTA TTCGGTCTGT GTGGCCCATA TGAACGACCA TGGGCAGAGC GAAAGTTTCG TGGCGATATC GGGGGGGCTG CTGATCGTCT TTTCCATTGG GTCGATCATC GGCCCGACGG TGGCGTCCAT CGGCGTTTCG ACTTTCGGCA TTGCCTCCAT TTTCCTGGTA ACGGCGACAG TTCACCTGCT TTTTGCGGCG TATACCGGCT ACCGGATCAC TTCTGCCCCT GCGCTGACCG GGGAGCAGCG CAGCGACTTC GTCGCGGTGC CTTTTACCCA GGTGCAGCCG CTGCCGACAG AGCTCGACCC GCGGGCCTCG GACGAAGCTC TGGCGCCGGA AGAGGCGAGC GAGACGGACG CAACGGCACG TTGA
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Protein sequence | MPRTLAPVFS LLLATAILLI GNGLLGTLIP IRAGIDGFAI TTVGVIGSVY FAGFLVGCMA TPHVVHRAGH IRSFAAFCGL ASVAPLIHAL SSDPFIWGLM RILTGFCFAG LYMVIESWLN EQSTNETRGR FFSTYVIVNL SALTVGQFML NAADPGGFAL FAVCSILTSL ALVPVALTTS VQPMPIQSTR IDVWKLYALS PVGLIGSFVV GLTNAPFWTL APLYASESGL DMSGISLFMA AAIIGGAIAQ WPIGRLSDQM DRRRVIVVVS IGAALGEIAL VIAGSGGSVT AVMLAGFLFG VFGLTLYSVC VAHMNDHGQS ESFVAISGGL LIVFSIGSII GPTVASIGVS TFGIASIFLV TATVHLLFAA YTGYRITSAP ALTGEQRSDF VAVPFTQVQP LPTELDPRAS DEALAPEEAS ETDATAR
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