| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3168 |
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| Symbol | |
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| ID | 5454659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3379794 |
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| End bp | 3381689 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878757 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001414431 |
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| Protein GI | 154253607 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0864433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0183714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATT CACTACGGAG AAACGCCTCG GGCTGGGTTG CCAAGGTGCT GATCGGCCTG
CTCGCGCTCA GCTTCGCGGT CTGGGGCATC GCGGACATCT TCACCGGCTT CGGCGGCGAT
ACGGTCGCGG AAGTGGGCGA CCAGAAGATC GACGCCGCGA CCTATCAGGT CGAGCTCCGC
AACGAGATGA ACCAGTTCTC CCAGCGCCTC GGGCAGCCGC TGTCGCTCGA CCAGGCGCGC
CAGTTCGGCA TCGACCGCGC CGCTCTGTCG CGGCTTATCA GCCTTGCGGC CCTGGACGGC
GCGGCAAGCG ACCTCGGCCT TGCCGTGGGC GATGAGGCCG TCGGCATCGA CATCACGACC
GACCCCAACC TGCAGGGCCC CTTCGGCCGC TTCGACCGCG ACCTTTTCCG CCAGTCGCTG
CAGCAGAACG GCATTTCCGA AGAACGCTTC ATCGAGCAGC GCCGCCGCGC CATGTCGCGC
AAGCAGGTCA TCGAGGTGAT CCAGGTCGGC GTCGCCGCGC CGGAAGCACT TATCGAGATG
GTGAGCCGCT TCCAGGAAGA GACCCGCGTC GCAGGTTACG TCATCCTGCC GCAATCCCTT
GTCGGCGAGA TCGCCGATCC GGACGAGGAG ACCGTTCAGA AATTCTATGA AGCCGGTGCT
TCCGCCTTCA CGCTCCCGGA AACGCGCGAC TTCAGCATCA TGGTCCTCGA GCCCGAGGAT
GTGACGCGCA CGATGGCCGT GTCGGAAGAA GACCTCCAGG CCGCCTATGA GCAGCGCCGG
GGCGAGTATG ACGTGCCGGA GCGCCGCGAC GTTCATCAGA TCACCTTCGC CAGCGAAGAA
GAGGCCAACG AGGCACTCAC GAAGCTGCGC GGCGGCGAGA ATGTCGAAAC CGTCGTTAAG
GGCCTCGGCC TCACCATGAA AGATGTCGAT CTCGGCAAGG TCTCTCGCGA CGATATGCTG
TCGCCCGAAC TCGCGGATGC CGCCTTCTCG CTCGAAGGCA CCGGCTATAG CGAGCCCGTG
CGGGGACCGC TCGGCTGGTC GATCCTGCAT GTCACCGGTA TCGAGCCCGG CAAGCCCAGC
ACCTATGAAG ACGTGAAGGA AGAGCTGCGT GCGGCAATCG AACTCGAACT GGCGCGCGAT
CAGATCTACG ACATCCAGAA CACCATCGAG GACGCCCGCG CCGGCGGCGA GCCGCTCGCC
GATGTCGCGA AGCGTTACAA CCTTACCGTC CGCTCCATCG ACGGCATCAC CGCCGACGGA
AAGACGCGGA ACGGCGATAC GGTCGAACTG CCGGAACTGC CGGACCTCCT GAACACGGTC
TATGAGAACC AGCAGGGCGA CCAGATCCCG CCGCTCGATT CCGGCAAGGA CGGCTATTAC
TGGGTCGAGA TCGACGCTGT GAACCCCGCC GAACTGCAGC CGCTCGACGA AGTGCGCGAC
CGCGTGGTGA GCATCTGGAA GCAGCAGAAG CGAGCTGACG ACCTGGAAGC CCTGGCCACC
TCGCTCGTGG AGCGTGGCAA TGCGGGCGAG AGCTTTGAGA AGATCGCGGC GGAATATGGC
CGCAGCGTTC TCTCCACGCC TCCTCTCCAG CGTTACGCGC AGAACGACAC CTTCTCGCGG
ACCGCCGTCA CCCGGCTTTT CGCCGCGCCT GAAGGCGGCT TCACCTTCGG CCCGGTCGGC
CTCGGTGACA GCCTCATCGT CATGCAGGTC AAGGATGTCC GCTCGCCGCA GCTCGACGCG
AACAGCGACA AGTACAAGGA GACGCGGACA ACCCTGGTCG ATGCGATACA GGCCGACATG
CTGCAGACCT TCGTCGTCGG CTACCAGCAG GAGCTCGGCG TCGAGGTCAA CAACACGCTG
TTCCAACAGA TGACGGCGAC GGACACCGGC CTATGA
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| Protein sequence | MLDSLRRNAS GWVAKVLIGL LALSFAVWGI ADIFTGFGGD TVAEVGDQKI DAATYQVELR
NEMNQFSQRL GQPLSLDQAR QFGIDRAALS RLISLAALDG AASDLGLAVG DEAVGIDITT
DPNLQGPFGR FDRDLFRQSL QQNGISEERF IEQRRRAMSR KQVIEVIQVG VAAPEALIEM
VSRFQEETRV AGYVILPQSL VGEIADPDEE TVQKFYEAGA SAFTLPETRD FSIMVLEPED
VTRTMAVSEE DLQAAYEQRR GEYDVPERRD VHQITFASEE EANEALTKLR GGENVETVVK
GLGLTMKDVD LGKVSRDDML SPELADAAFS LEGTGYSEPV RGPLGWSILH VTGIEPGKPS
TYEDVKEELR AAIELELARD QIYDIQNTIE DARAGGEPLA DVAKRYNLTV RSIDGITADG
KTRNGDTVEL PELPDLLNTV YENQQGDQIP PLDSGKDGYY WVEIDAVNPA ELQPLDEVRD
RVVSIWKQQK RADDLEALAT SLVERGNAGE SFEKIAAEYG RSVLSTPPLQ RYAQNDTFSR
TAVTRLFAAP EGGFTFGPVG LGDSLIVMQV KDVRSPQLDA NSDKYKETRT TLVDAIQADM
LQTFVVGYQQ ELGVEVNNTL FQQMTATDTG L
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