| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3154 |
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| Symbol | |
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| ID | 5453830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3369820 |
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| End bp | 3370728 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878743 |
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| Product | phytanoyl-CoA dioxygenase |
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| Protein accession | YP_001414417 |
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| Protein GI | 154253593 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0588837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0946962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAC TTCAGATGCT GCCCGCGGGC GCCTCTACCG ATGAAATCCT CGACGTGCTG
AAACGCGACG GCGCCCTCAT TCTGACGGGC GTGCTGAGCC GCCAGGAACT CGATCAGGTT
CTCGCCGAGA CCATGCCCTA TATCGACGCG ACGCCGAACG GTGCGGATGA TTTCGTCGGT
CACAAGACGA CGCGCACCGG CGCGCTCGTG GCGCGTTCGG CCAAGTGCCG CGACCTCGTT
TCCCACCCGA TGATCGTCAA GGCGGCGGAA ACCTTCCTGA AGCCCTTCTG CGAGCGCATC
CAGCTCCATC TGACGCAGGT AATCCGCATT CGTCCCGGCC AGACGGCGCA GGCAATCCAC
CGCGACCGCT GGGCCTGGGG CACGCACCTG AAGAATGTAG AACCGCAGTT CAATACGATC
TGGGCGATCA GCGACTTCAC GAAGGAAAAC GGCGCCACAC AGGTCTGCCC CGGCAGCCTC
GGCTGGCCGG ATGATTATCA GCCGACGGAA GATCAGATCG GTTATGCGGA AATGCCGGCC
GGTTCAGTGC TGGTCTATTC CGGCGGCGTC TTCCATGGCG GCGGCGCAAA CGTCTCCAAT
GGCGACCGCA TCGGCATCAA CATCACCTAC ACGCTTGGCT GGCTGCGTCA GGAAGAGAAC
CAGTATCTCT CCTGCCCGCC TGAAATCGCG AGAACGCTTC CGCGCGAGCT GCAGGCGCTG
ATCGGCTATT CGATGGGGGG CTATGCGCTT GGCTATTACT CGCCGCCGGG CGCCCCCGGC
GAAGGCCCCG AAAGCGTGCC GCCCGAATAT GCCCTCGGTC ACACGGAGAC CGCCATCTCC
ACGCTTGGCA GCGCGGACCT GCTCGAAAGC ATCCGTGACG AAATCAGGGG CGAGAAGCAG
ACGGCCTAG
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| Protein sequence | MPKLQMLPAG ASTDEILDVL KRDGALILTG VLSRQELDQV LAETMPYIDA TPNGADDFVG
HKTTRTGALV ARSAKCRDLV SHPMIVKAAE TFLKPFCERI QLHLTQVIRI RPGQTAQAIH
RDRWAWGTHL KNVEPQFNTI WAISDFTKEN GATQVCPGSL GWPDDYQPTE DQIGYAEMPA
GSVLVYSGGV FHGGGANVSN GDRIGINITY TLGWLRQEEN QYLSCPPEIA RTLPRELQAL
IGYSMGGYAL GYYSPPGAPG EGPESVPPEY ALGHTETAIS TLGSADLLES IRDEIRGEKQ
TA
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