Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3152 |
Symbol | |
ID | 5453637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3367636 |
End bp | 3369042 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640878741 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001414415 |
Protein GI | 154253591 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.229393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.25439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATTCG AACGCCGCGC GATTGGAGTA TCCGCGGTGT CGCAAGAAGC TCGGCTCGCG AGAAAAACGG AAGAGGAGGT CACCCGCGAT CTGGCCGTGA CCTTTCGTGA CTCGCTTTTT CCCATCTCCA TCTGCATCGC AGTTCTCTTT GCCATCTTCG CCGCGATTCA TCCCTTCATT CTTCCGCCGG AGCTGCGGCT CTGGATGGTC GGTGTCGCGC TTTCCGGATC GGCAGCCTCG GCAATTATCG CGTTTCTTGC CGGACGAAAT CTGATCGCGG CGCCATATGC GCCGGTTGCG GGTTTCGTCC TCGTTGCCTT CTGCCTCTTG AATTCCACAG CGCATATGTA TCTCACCGGC GATGAGAACC AGTCGACCAA TTACGGACTG CTTCTGGTTG CGATGGGTCT CTTTTTTCTG TCCCGCCTCT ATCTCGCGCT TTCCTTTGTC CTGATCCTCG GCGTCTGGGC CGGCACAGCC CACTTCATGG GCGGGCTGAA CGGCGAAGGC TTTCATTTCG CTTTCATGAT GTTCCTCGGC ATGGTGATAG CCATTCTGGC GCAGGAAATT CGTGTACGAA TATACCGGCG CGTGATTTCC ATGCGCGAGG AAGCGGCGGA ACGCGAGCGG AGCCTTGCCC AGGCACTTGC CAAGACGCGC CTCTACGCGT CAATGGAACG AGAGAACAAG GCGAAAACGG AATTCCTCGC AAACATGAGC CATGAGCTTC GTACCCCGCT GAACGCCATC CTCGGCTTCT CCGAAGCCAT GCAGATGGAG CTTTTCGGAC CGCTTGGTCA TCCGCGCTAT GTCGAATACA TGCACGATAT CCACCATGCC GGTACGCACC TCCTATCCCT CGTCAACGAC ATTCTCGACC TGTCGCGCAT TGAACTCGAA GGCATGAGCC TCACGCCGCA GAGGATCGAC TTTTCCGGTG TCTGCCACAA CTGCCTTGCC ATCGTTCGCG GCCGCGCCGA GCGCGGAGGC GTTCAGCTAA TATTTGAATG CGCGCCGCCT TTTCCGGAAG TCGAAACGGA TGAGCGGCGG CTGAAGCAGG TTCTGATCAA TCTGCTGAGC AATGCTGTCA AGTTCACGCC CGCCGGCGGC ACGGTCTCCC TTGATGTCAG GCCGGCGCCC GATGGCGGGG GAATCATACG TATCCGCGAT ACTGGAATCG GCATGAGCGA GACGGAGGTC GAACAGGCCC TCCGGCCCTT CTGGCAGGCG GATGCCGGGC TCGACCGCTC TTTCGAGGGC GCGGGGCTTG GTCTCGCTCT CGTCAGCGAG CTTCTTCAAC TGATGGGCGG CAGCATTACC ATCGAAAGCG AGCGCGGCGC CGGCACTCTC GTTACAGTCG GGCTTCCTCC CAGCATTCCT GCCTCGGCCC GCACTGCGGT CGCTTGA
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Protein sequence | MAFERRAIGV SAVSQEARLA RKTEEEVTRD LAVTFRDSLF PISICIAVLF AIFAAIHPFI LPPELRLWMV GVALSGSAAS AIIAFLAGRN LIAAPYAPVA GFVLVAFCLL NSTAHMYLTG DENQSTNYGL LLVAMGLFFL SRLYLALSFV LILGVWAGTA HFMGGLNGEG FHFAFMMFLG MVIAILAQEI RVRIYRRVIS MREEAAERER SLAQALAKTR LYASMERENK AKTEFLANMS HELRTPLNAI LGFSEAMQME LFGPLGHPRY VEYMHDIHHA GTHLLSLVND ILDLSRIELE GMSLTPQRID FSGVCHNCLA IVRGRAERGG VQLIFECAPP FPEVETDERR LKQVLINLLS NAVKFTPAGG TVSLDVRPAP DGGGIIRIRD TGIGMSETEV EQALRPFWQA DAGLDRSFEG AGLGLALVSE LLQLMGGSIT IESERGAGTL VTVGLPPSIP ASARTAVA
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