| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3132 |
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| Symbol | |
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| ID | 5453865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3345497 |
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| End bp | 3346645 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878722 |
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| Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001414396 |
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| Protein GI | 154253572 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.317622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.3958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG CCGCGCTGAT TGTGGCGGCC GGCCGCGGCA GCCGCGCGGG ACCGGGCGCG
CCCAAGCAAT ACCGCCTTCT GGCCGGTCAG CCCGTCCTTC GGCGCACCCT CGCCGCTTTT
GCCAACCATC CAGAGATCAT GACGGTCCTG ACGGTGATCC ATCCCGAGGA CGCGTCAGCA
TTCGAAGCTG CATCCGGCGG ACTGCCAAAG CTTCTCGAAC CGGTTTTCGG AGGCTCAACG
CGGCAGGACT CCGTGCGCGC CGGGCTGGAG GCGCTCAATG CGGACGCACC CGACCTTGTT
CTCATCCATG ATGGCGCGCG GCCCTTGATT TCCGCTCCGG TTATTTCGGC CTGCATCGCC
GCCCTCTCCA CCCACGAGGG GGCTCAGGCA GGCCTCTCCC TTACCGATAC GATACGCCGG
ACGGATAAGG GCATGGCGGC AGAAACGGTA GCGCGAGATA CGCTCTGGCG CGCGCAGACA
CCGCAAGCTT TCCGGTTCAA CGCTATCCTC GACGCGCACC GGCAGGCTTC GGGCGGGGAA
CATACCGACG ACGTATCCGT GGCGCTGGCG GCGGGGGTAA AGGTGGCTAT GGTCGAGGGA
GATCAGGACA ATATCAAGAT CACAAGCGCA GCGGACATTC AGCAGGCGGA ACGTATTCTG
ATGCGGAGCG GCGAGACGCG AACAGGCCTT GGATATGACG TTCACCGCTT CGGCCCAGGC
GATTACGTCT GGCTTTGCGG CGTGAAGGTT CCACACGATG CCGGCCTTGT CGGCCATTCC
GACGCCGATG CCGGACTTCA CGCGATAACC GACGCTGTGC TCGGAGCGAT CGGAGCGGGC
GACATCGGAA GGCATTTTCC GCCGAGCGAT CCCAAGTGGA AAGGCGCGCC TTCAGAGATA
TTTCTCGCTC ACGCGGCCAA GCTGGCGACG GAGGCCGGAG CACGCGTGTC GAATGTCGAT
GTCACCTTGA TATGTGAGTT GCCGAAAATC GGACCTCACG CCGATGCGAT GCGAGCGCGG
ATTGCCGACA TACTCGGGAT CGAAAAGGGA CGCGTCAGCG TTAAGGCAAC GACAACCGAG
GGTCTCGGCT TCACCGGACG CGGCGAGGGA CTGGCCGCAC AGGCAATCGT CACCCTGATC
ATCGGGTAA
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| Protein sequence | MKVAALIVAA GRGSRAGPGA PKQYRLLAGQ PVLRRTLAAF ANHPEIMTVL TVIHPEDASA
FEAASGGLPK LLEPVFGGST RQDSVRAGLE ALNADAPDLV LIHDGARPLI SAPVISACIA
ALSTHEGAQA GLSLTDTIRR TDKGMAAETV ARDTLWRAQT PQAFRFNAIL DAHRQASGGE
HTDDVSVALA AGVKVAMVEG DQDNIKITSA ADIQQAERIL MRSGETRTGL GYDVHRFGPG
DYVWLCGVKV PHDAGLVGHS DADAGLHAIT DAVLGAIGAG DIGRHFPPSD PKWKGAPSEI
FLAHAAKLAT EAGARVSNVD VTLICELPKI GPHADAMRAR IADILGIEKG RVSVKATTTE
GLGFTGRGEG LAAQAIVTLI IG
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