| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3128 |
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| Symbol | |
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| ID | 5453735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3339254 |
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| End bp | 3341593 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878718 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001414392 |
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| Protein GI | 154253568 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.865325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.321459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACCGA CAGAGCAACC GAGCGAGGCC CGAGAAGCAA GGGCCGAAAG TTGGGAAAGC
CGCCTTTGGC AGCTGGTGAG CCGTCGCGGC TTTTCGACCA CGCTTTCGGT CGGTCTGGTG
GTCGCCGCTA TCTGCCTTGG CTCCTTTACC TACATGCTTC TGACCGGACT GACGCCGTTT
TCGCCAACAC GGCCGGTTCT CATCTCGCTC CTTCTGGCGA ACCTGACAGT CGTCCTCATT
CTCTTCGCGC TGATCTTCTG GCGCATGATC CGCATTATTC TGGCCCGGGT CAGCGGAACG
GCGGGAGCGA AGCTTCATTC CCGGCTCGTC ACGATGTTCG CGATCGTCGC GGTCATGCCC
GCCATTATCG TGGCCGTCTT CGCCGCGGTC ACCTTGAACC GCGGCCTCGA TACCTGGTTC
GGTGAACGGG CGCAGCTCAT CATCTCAAAC GCGGAAACCG TCGCTGAGGC CTACCTCAAC
GAGCATCGTC AGGTGCTGCG CGGCGATACG CTCGCCATGG CAACCGACAT CCAGCGCGAG
GCCGAATTGC TGACCACGGA CCCGGCAATT TTCCAGCGGC TGATCACCGG GCAGATGCGC
CTGCGGTCGT TGCAGGCGGC TTATGTCGTC AAATCCGATG GGCGCATTCT CTCCAAGGCC
AGGGCGAGCG TCGAGGTCGG GATGCCGGCT GCAGAGTATT TCGAGGTCGC ACGCGCGGGC
GACGTCGCTC TTTTCATCAT GGACGACTAC AACCAGATCC GTGCTCTGGT CGCGCTTCCG
GCTGTGCCGG ATACCTATCT CTACGTGGCG CGCTTTGTGG ACGCGCGGGT GCTCAACCAC
CTTGCCGAGA CGCGAGCTGC CGTCAGTGAA TATGAAAGCC TCGAAAGCCG CCGCAGCCAG
TTCCAGGTTA CCTTCGCGCT CATTTATGTA ACCGTCGCCT TGATCACGCT GCTGGCGGCG
ATCTGGCTCG GCCTCTGGGC GGCCAATCGT ATCGTGGACC CAATCTCTCA TCTCGTCCGC
GCAGCCGAGC GGGTCAGCGT CGGCGACCTG CGCGCCCGCG TTCCCGTCGG CGGTAGCGGC
GACGAACTCG ATATGCTGAC CGGTGCCTTC AACCGGATGA CCAGTCAGCT CGAAAGCCAG
CGCAACGATC TCATCGAAGC AAACCACCAG CTCGACGAGC GCCGCCAATT CACGGAAGCG
GTTCTCTCCG GCGTCAGTGC TGGTGTTCTC GGCCTCGACA ATGAAGGGCG CATCACCCAT
GCCAATCGCG CCGCCTTGCG TTTCTTCGCT CTGACGGAAG CCGAACTCAT AGGCCGGATG
ATAGCGGCGG CCGTGCCTGA AATGGCTCTT GCCGTCGCAG ACGCCCGCGC GCATCCCGAT
CGCACGGCGC AGGCGCAGGT AGTAATTCCC CGTGCCGGGC AGGACCGGAC GCTCAATTTG
CGCGTCACCC GCGAAATGAC GGATTCGGGG CAGGGCGGTT TTGTGCTTAC CTTCGACGAC
ATAACCGAGC TTGTGCGTGC GCAGCGAACC TCTGCCTGGG CGGACGTCGC CCGCCGCATC
GCGCACGAGA TCAAGAACCC GCTGACGCCT ATTCAGCTTT CGGCCGAGCG GCTGCGCCGT
AAATACAGCA AGGAAATAAC GACGGACCCG GACGTCTTTG AGCAATGCAC GCAGACAATC
ATTCGTCAGG TGAACGATAT CGGCCGGATG GTGGATGAAT TCTCATCCTT CGCACGCATG
CCGTCGGCGT CGATGAAGCC GCTCGACATC AACGAAATTC TGCGGCAATC GGTATTCCTG
CAGCGCGTCG GCCATCCGGA CATTGAATAT CAGCTCACAA TGCCGGAAAC GCCGACCATT
CTCGAATGCG ATGGCCGTCT CGTAAGCCAG GCGCTTACAA ACATCCTGAA AAATGCGGCG
GAGGCCATCC GCGGGCGCGA AGAGGATGAG GAAGAAGATT CGGCCGGGAC AAAAGGCCAC
AAGCAGGACG ATGTCAAACT GGGGCGCATA CACATTGCCC TGGCAGCGGA CGAGAATAAT
GTAACCGTCA CGGCGACCGA TTCCGGTTGT GGTCTCCCTG AAACCGGCAG GTCCCGCCTG
ACAGAACCCT ATATGACGAC GCGGGCCAAA GGCACGGGGC TTGGCCTCGC GATTGTGAAC
AAGGTCATGG AAGATCATGG CGGTGAACTT GTCCTTGAGG ACGCGCCGGT GAGCGAAGGC
TGGGAAAGCG GTGCGCGTGT GCGGCTCGTA TTTCCGCGCA AGCGCGCCGC GGCGAGCGGG
TTGGAAAACG GTGCGCATGA AGGCGCCGGT GTAATCGAAG AGGCGGTCGA TGGCGTCTGA
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| Protein sequence | MVPTEQPSEA REARAESWES RLWQLVSRRG FSTTLSVGLV VAAICLGSFT YMLLTGLTPF
SPTRPVLISL LLANLTVVLI LFALIFWRMI RIILARVSGT AGAKLHSRLV TMFAIVAVMP
AIIVAVFAAV TLNRGLDTWF GERAQLIISN AETVAEAYLN EHRQVLRGDT LAMATDIQRE
AELLTTDPAI FQRLITGQMR LRSLQAAYVV KSDGRILSKA RASVEVGMPA AEYFEVARAG
DVALFIMDDY NQIRALVALP AVPDTYLYVA RFVDARVLNH LAETRAAVSE YESLESRRSQ
FQVTFALIYV TVALITLLAA IWLGLWAANR IVDPISHLVR AAERVSVGDL RARVPVGGSG
DELDMLTGAF NRMTSQLESQ RNDLIEANHQ LDERRQFTEA VLSGVSAGVL GLDNEGRITH
ANRAALRFFA LTEAELIGRM IAAAVPEMAL AVADARAHPD RTAQAQVVIP RAGQDRTLNL
RVTREMTDSG QGGFVLTFDD ITELVRAQRT SAWADVARRI AHEIKNPLTP IQLSAERLRR
KYSKEITTDP DVFEQCTQTI IRQVNDIGRM VDEFSSFARM PSASMKPLDI NEILRQSVFL
QRVGHPDIEY QLTMPETPTI LECDGRLVSQ ALTNILKNAA EAIRGREEDE EEDSAGTKGH
KQDDVKLGRI HIALAADENN VTVTATDSGC GLPETGRSRL TEPYMTTRAK GTGLGLAIVN
KVMEDHGGEL VLEDAPVSEG WESGARVRLV FPRKRAAASG LENGAHEGAG VIEEAVDGV
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