| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3124 |
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| Symbol | |
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| ID | 5454725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3335130 |
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| End bp | 3335378 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640878714 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001414388 |
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| Protein GI | 154253564 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.344226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAGA AGACCCATAA CCTGCAGGAT ACGTTCCTGA ACCACGTTCG CAAGAACAAG
ACGACCCTCA CCATCTTTCT GGTAAATGGC GTCAAGCTTC AGGGCGTGGT CACCTGGTTC
GACAACTTTT GTGTGTTGCT GCGCCGGGAC GGCCATTCGC AGCTCGTGTA TAAGCACGCG
ATATCGACCA TTATGCCGGC CCAGCCCGTT CAGCTTTTCG AGCCTGAAGC CAACGGGGAG
GAGGGCTGA
|
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| Protein sequence | MNEKTHNLQD TFLNHVRKNK TTLTIFLVNG VKLQGVVTWF DNFCVLLRRD GHSQLVYKHA
ISTIMPAQPV QLFEPEANGE EG
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