Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3123 |
Symbol | |
ID | 5454716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3333695 |
End bp | 3335119 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878713 |
Product | GTP-binding protein HSR1-related |
Protein accession | YP_001414387 |
Protein GI | 154253563 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.406927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTGAAG AACCCAAGGA AGAAGGCGCC GAAAAGCGCG GCGAGCGTGG CTTTCGAGTG AAGCCCGCCG AGTTGACGCG CGCTTTCGTG GTTGTGCCCT GGCTCAAATC CGTCGCGAAG CAGGCAAAGA GAGGAGGGGG CGGACGTTCC CCCGAATCCC GTCTGGACGA GGCCGTCGGT CTCGCTGCCG CCATTTCGCT GAACGTTGTG GGAAGCGTCG TTGTCCCGCT TGCGAGCCCG CGGCCGGCAA CGCTTTTCGG CGAAGGCAAG GTCGACGAAA TCAAGGGTCA GATTGCGGAA CTTCGGGTCG ATCTCGTCAT CGTCGACGGG GCCCTCGGTC CGGGTCAGCA GCGCAATCTC GAAAAAGCCT GGAACGTGAA GGTGCTCGAC CGCACCGGTC TTATCCTCGA AATCTTCGGC GAGCGTGCGC GAACGCGCGA AGGCTCGCTC CAGGTTGAAC TGGCGCATCT CAATTATCAG AAGAGCCGCC TCGTCCGCAG CTGGACCCAT CTGGAGCGTC AGCGCGGCGG CTTCGGCTTC CTCGGCGGCC CCGGCGAAAC GCAGATCGAA GCCGACAGGC GCCTCATTCA GGAGCGCATC GCGAAAATCG AGCACCAGCT CGAAACCGTG AAACGGACGC GCGAACTTCA TCGCAAGAAG CGCCGCGAGG CGCCATATCC GATTGTCGCG CTGGTCGGCT ATACCAATGC CGGCAAGTCG ACTCTGTTCA ACCGGCTTAC GGAAGCCGGA GTCTTCGCCG AAAACCTTCT CTTCGCGACG CTCGACCCGA CAATGCGCGC CCTCGTTCTC CCGAGCGGCC GCAAGATCAT CCTGTCGGAC ACAGTGGGCT TCATTTCGGA CCTGCCGACG CATCTCGTCG CCGCCTTCCG CGCCACGCTC GAGGAAGTTC TGGAAGCCGA AGTGATCCTG CATGTCCGCG ACGCCGCGCA TGAGGAAACC GCGATCCAGA AGACGGATGT CGAAAAAGTT CTGACCTCGC TCGGCGTCAC CAGGGAAAGC ACAGCGGCGA ACGGTCAGCA CGTCGTGGAC GTCCTGAACA AGATTGACCT GCTGGAAGGC GAGTTCCGCG ACGCCGCCGT CAATCTCGCC ATGCGCGAGC CGATGACGGT TGCCGTCTCC GCCCTGACCG GCGACGGAAC GGAAAACCTC CTTAACCTCA TCGACAGCCT GATCGTCGAT GACGAACGGC CCGTACATTT CGATGTGCCG GCGAATGAGG GAGAGGCCAT CGCCTGGCTT CACGCCAACG CGCATATCCG CAACCGTGTC GATGGAGACG AGGGCATCGT CCATCTCGAT CTCGGCTTGA CCCCCATCGT TGCCGGCCGT TTCGAAAAGC GGTTCCCGGC GCTCGCCCGG CAGCTCGGTG AAGCCGCCGC TGCGGCCGCA GCTGCGGCGG AATAG
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Protein sequence | MTEEPKEEGA EKRGERGFRV KPAELTRAFV VVPWLKSVAK QAKRGGGGRS PESRLDEAVG LAAAISLNVV GSVVVPLASP RPATLFGEGK VDEIKGQIAE LRVDLVIVDG ALGPGQQRNL EKAWNVKVLD RTGLILEIFG ERARTREGSL QVELAHLNYQ KSRLVRSWTH LERQRGGFGF LGGPGETQIE ADRRLIQERI AKIEHQLETV KRTRELHRKK RREAPYPIVA LVGYTNAGKS TLFNRLTEAG VFAENLLFAT LDPTMRALVL PSGRKIILSD TVGFISDLPT HLVAAFRATL EEVLEAEVIL HVRDAAHEET AIQKTDVEKV LTSLGVTRES TAANGQHVVD VLNKIDLLEG EFRDAAVNLA MREPMTVAVS ALTGDGTENL LNLIDSLIVD DERPVHFDVP ANEGEAIAWL HANAHIRNRV DGDEGIVHLD LGLTPIVAGR FEKRFPALAR QLGEAAAAAA AAAE
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