| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3114 |
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| Symbol | |
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| ID | 5455038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3325492 |
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| End bp | 3326298 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878704 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_001414378 |
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| Protein GI | 154253554 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.677659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.341817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCTGC CCGTTCTCAT CGACAGCCAT TGCCATCTCG ACTTTCCCGA TTTCGGGGCG
GAGGTCGAGG AGGTGGTGGC GCGCGCGCAT GAGGCGGGCG TGGGGCTGAT GGTGACGATC
TCGACCAAGG TGAGCGAGTT CGACCGGGTG AGGGCGGTGG CGGAGCGGTT TCCCCATGTC
TATTGCACGG TCGGCATCCA TCCGCATGAG GCGGCGAGCG AGCCGGAGAC GGATAAGGCG
ACGCTGATCG AAATGGCGAA GCATCCGAAG GTCGTCGGCA TCGGTGAGAC GGGGCTCGAC
TATTACTATG AGCACAGCCC CCGCGAGGCG CAGAAGCGGA ATTTCCGCTC GCATATCGCG
GCGGCGCGCG AGACGGGGCT GCCGCTGATC GTGCATACGC GCGACGCGGA TGAGGACATG
GCTCAGATAC TGGATGAAGA AACGGGGAAG GGGGCTTTTC CGGGGCTGCT GCATTGCTTC
AGCTCCAGCC CGCAACTCGC TGAAAAGGCT CTGGCACTCG GGCTCTACAT CTCGCTTTCC
GGCATCGTGA CCTTCAAGAG CGCCGAAGAA TTGCGCGCGA CGGCGGCGAC GGTGCCGATG
GACCGGCTGC TGGTGGAGAC GGATGCGCCT TACCTGGCGC CGGTGCCGAA GCGCGGCAAG
CGGAACGAAC CCGCCTTCGT GGTGCATACG GCGGCGAAGG TGGCGGAGAT CAAGGCGGTG
CCGGTGGAAG AGCTGGCGGC GGCGACGACG GCCAATTTCC TCAGGCTGTT CTCGCGCGTG
CCGCCCGATG CGGTGTTGCG CGGATGA
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| Protein sequence | MTLPVLIDSH CHLDFPDFGA EVEEVVARAH EAGVGLMVTI STKVSEFDRV RAVAERFPHV
YCTVGIHPHE AASEPETDKA TLIEMAKHPK VVGIGETGLD YYYEHSPREA QKRNFRSHIA
AARETGLPLI VHTRDADEDM AQILDEETGK GAFPGLLHCF SSSPQLAEKA LALGLYISLS
GIVTFKSAEE LRATAATVPM DRLLVETDAP YLAPVPKRGK RNEPAFVVHT AAKVAEIKAV
PVEELAAATT ANFLRLFSRV PPDAVLRG
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