| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3113 |
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| Symbol | |
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| ID | 5454287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3323933 |
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| End bp | 3325495 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878703 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_001414377 |
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| Protein GI | 154253553 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.249665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.181063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCC CCAAAGCCTT CTACATCACG ACGGCAATTT CCTATCCCAA CGGTCCGCCT
CATATCGGCC ATGCCTATGA GGTCATCACC ACGGATGTGA TCGCGCGCTA CAAGCGGCTC
GACGGCTACG ACGTGCGGTT TCTCACGGGC GTGGACGATC ACGGCCAGAA GATGGCGCAG
ACGGCGAAGG CAAAGGGCAC GACCCCGCAG GCGCTGGCCG ACGAGATGGC TCCGAAGTTC
CTTGCAATGG ACGAGCGGCT CAACATTTCC AATGACGATT TCATCCGCAC CACCGAGGCG
CGGCATGAAA AGGCGTGCCA GCATCTCTGG GAGAAAATCG CGGCGAAGGG CGACATCTAT
ACCGGCACCT ATTCGGGCTG GTATTCGGTG CGCGACGAGG CGTTCTACGA CGAGGACGAA
CTCACCACCG GCGAAGGCGG ACAGAAGCTT GCACCGGGAA CGGGCACGCC GGTCGAATGG
ATGGAGGAGG AAACCTATTT CTTCCGCCTG TCCGCCTATC AGGAAAAGCT GCTTGCGCTT
TACGAGTCGC AGCCCGACTT CATCCAGCCG GCGTCGCGGC GCAACGAAAT CCTCGCCTTC
GTCAAACGCG GGCTGAACGA TCTTTCCATT TCGCGCGCGC GGACCAAGCT CGATTGGGGC
GTCGGGGTGC CCGGCGATCC GAACCATGTG ATGTATGTCT GGATCGACGC CCTGACCAAC
TACATCACGG GCCTTGGCTA CCCGGATATG GACGGCGATC TTTTCAAGCG GTACTGGCCG
GCCGATATGC ATATCATCGG CAAGGATATC GTGCGTTTTC ATGCGGTCAT CTGGCCGGCG
ATGCTGATGG CGGCGGAGGT GGCGCTGCCC AAACGCGTGT TCGGGCACGG CTTTCTCAAC
GTCCGCGGCG AGAAGATGTC GAAGTCGGTC GGGAACGTGA TCGATCCGTT CACGATCACC
GATACTTACG GCGTCGATCC GATACGCTAT TTCTTCTGCC GCGAGGTGAC CTATGGCGCG
GATGGAAGTT ACAGCCATGA CACGGTGGTG AACCGGATCA ATGCCGATCT CGCCAACGAT
ATCGGCAACC TGGCGCAACG CTCGCTTTCG ATGATCGCCA AGAACTGCGG CGGGGAAGTG
CCTGCCTATG GCGCGTTCAC GGCCGAGGAC AAAGCCGTGC TCGATGCTGC GGCGGCGCTG
CCGGAGAAGA CGCGCGAGCA GATGGAGCGG CTCGAGATTC ACTCCTATGT GGGCGAGGTA
TTCGCGGTGG TCAGCGAGGC CAACCGCTAT TTCGCCGGCC AGGAACCCTG GGCGCTGAAG
AAGACCGACC CCGAACGCAT GGGCACGGTG CTCTACGTGA CGGCGGAGGT GGTGCGCCGC
TGTGCGCTGA TGCTGCAGCC GGTGATGCCG GCGTCGATCG CAAAGCTGCT CGACCTGCTG
GCGGTGCCGG AAGGCGCGCG GGCCTTTTCC GACATTGCCG CATCGCTGAC ACCCGGGACG
GCGCTGCCGG CGCCCGCGGG CGTGTTCCCG CGCTATGTGG AGCCGGAGGC CCTGTCGTCG
TGA
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| Protein sequence | MSAPKAFYIT TAISYPNGPP HIGHAYEVIT TDVIARYKRL DGYDVRFLTG VDDHGQKMAQ
TAKAKGTTPQ ALADEMAPKF LAMDERLNIS NDDFIRTTEA RHEKACQHLW EKIAAKGDIY
TGTYSGWYSV RDEAFYDEDE LTTGEGGQKL APGTGTPVEW MEEETYFFRL SAYQEKLLAL
YESQPDFIQP ASRRNEILAF VKRGLNDLSI SRARTKLDWG VGVPGDPNHV MYVWIDALTN
YITGLGYPDM DGDLFKRYWP ADMHIIGKDI VRFHAVIWPA MLMAAEVALP KRVFGHGFLN
VRGEKMSKSV GNVIDPFTIT DTYGVDPIRY FFCREVTYGA DGSYSHDTVV NRINADLAND
IGNLAQRSLS MIAKNCGGEV PAYGAFTAED KAVLDAAAAL PEKTREQMER LEIHSYVGEV
FAVVSEANRY FAGQEPWALK KTDPERMGTV LYVTAEVVRR CALMLQPVMP ASIAKLLDLL
AVPEGARAFS DIAASLTPGT ALPAPAGVFP RYVEPEALSS
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