| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3110 |
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| Symbol | |
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| ID | 5455303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3321062 |
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| End bp | 3321691 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878700 |
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| Product | dTMP kinase |
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| Protein accession | YP_001414374 |
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| Protein GI | 154253550 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.2545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.244995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCGCGCG CGCGATTTAT CACGCTGGAG GGCGGCGAGG GGGCGGGGAA ATCCACACAG
GTCCGGCGGC TGGCGGCGCG GCTGGAGGCG GCCGGTCAGC GGGTGACGAT CACCCGTGAG
CCTGGTGGGG CGCCGGGAGC CGAGGCAATC CGCCATTTAT TGGTCACGGG CGACGTGGCG
CGGTGGACGC CGAAGGCCGA GATGCTGCTG CATTTTGCGG CGCGCGAGGA CCATCTTTCC
CGCACGATCA GGCCCGCGCT GGAGCGGGGG GACTGGGTGA TTTGCGACAG GTTTGTCGAT
TCAACCATGG CCTATCAGGG TTTCGCGCAG GGGCTCGGGC CTGAATTAGT CAATGAATTG
AAGGAGATAG TGATCGGCGA CGATATGCCG GGGCTGACGC TTATCCTCGA TTTGCCGGTC
GAGACGGGGC TTGCGCGGGC GGGAAGCCGG GGGCAGGGAG CCGAGGACCG CTATGAGCGA
ATGGACTTGC GCTTCCATGA AACGCTTCGC CAAGCCTTTG AAACCATTGC CAAAAATGAA
CCAGAACGGT GCGTCATGGT GGATGCGAGC CAGACCGAAG ACGAGGTCGC GGAAGCCATA
TGGGCAGAAG TAAAACCTCG ACTGTCATGA
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| Protein sequence | MPRARFITLE GGEGAGKSTQ VRRLAARLEA AGQRVTITRE PGGAPGAEAI RHLLVTGDVA
RWTPKAEMLL HFAAREDHLS RTIRPALERG DWVICDRFVD STMAYQGFAQ GLGPELVNEL
KEIVIGDDMP GLTLILDLPV ETGLARAGSR GQGAEDRYER MDLRFHETLR QAFETIAKNE
PERCVMVDAS QTEDEVAEAI WAEVKPRLS
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