Gene Plav_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3102 
Symbol 
ID5454176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3314045 
End bp3314662 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content58% 
IMG OID640878691 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001414366 
Protein GI154253542 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.480753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.323994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGT ACAATTCGAT CGGGCCAAAT CCGCGTGTCG TGAAAATGTT CATGCACGAG 
AAGGGCATCG AACTTCCCCT TGCGGAAGTC GACCTGATGA AGGGCGAAAA TCGTCAGGAG
CCCTATCTTG CAAAAAACCC GGCCGGCCAG CTGCCGGCAC TCGAGCTCGA CAATGGAATG
ATCCTCGCCG AGATCACCGC CATTTGCGAA TATCTGGACG AGAAATTTCC GGGCGGGTCG
CTGATCGGCA CGACGCCGGA AGAGCGTGCG GAAACCCGCA TGTGGACGCG CCGCGTCGAT
CTCAATGTTT GCGAACCGAT GGCCAATGGC TTTCGCTTTT CGGAAGGCCT GCCGCTCTTC
AAAGACCGGA TGCGCTGTCT GCCCGAGGCT GCGGCCGGCA TGAAAGCCAT CGCGCAGGAC
AAGCTTGCAT GGCTCGACAA GCTGATGGCG GGCAAGGATT ACCTTGCGGG AAAGCGCATG
ACGCTGGCGG ATATTCTGCT ATTTGGCTTT CTCGACTTTG GCGCTGCGGT CGGTCAGCCG
ATCAACCCCG ACTTCAAGAA CATAACCGCC TGGTTCGATC GCATGAAGGG CAGGGCGTCT
GCGGCGGCAA GCGCCTGA
 
Protein sequence
MKLYNSIGPN PRVVKMFMHE KGIELPLAEV DLMKGENRQE PYLAKNPAGQ LPALELDNGM 
ILAEITAICE YLDEKFPGGS LIGTTPEERA ETRMWTRRVD LNVCEPMANG FRFSEGLPLF
KDRMRCLPEA AAGMKAIAQD KLAWLDKLMA GKDYLAGKRM TLADILLFGF LDFGAAVGQP
INPDFKNITA WFDRMKGRAS AAASA