Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3095 |
Symbol | |
ID | 5455494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3307117 |
End bp | 3307836 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640878684 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001414359 |
Protein GI | 154253535 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.165073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGCGCG ACAGACGACC CTATTTTATC CGCCGGATCA TCGATGGCTG GACGCGCTTT CAGGTGCAAC ATTTCATCGT GCCGGCCTTC GATGCCGTCG GCCCCGGTCT CGACATAACG AGCCCGCGTA ACCTGGAAAT CTGGGGCGGA GGGATAAGGG CCGGATCGCA TCTTCATCTT CATGCCGCGG AAGGCAATCT TGTGCGGCTT GCGACATGGC GTACAGGCGA CCGCGAAGGC CGCATTACAA TCGGCGACTA CGTGCTCATC AGTCCCGGCA CGCATATCGT GGCGTCCGAT GAAATCACCA TCGGCAGCAA CACGATGATC GCGAGCGGCT GCTACATATC GGACTCCGAC TGGCACGATA CCTATGATCG CACTGCGGAA CTCGACAAGC ACCGGCCGAT AAGGATCGGC GAAAATGTGT GGCTGGGCGT CCGCGCGATC ATCGGCAAGG GCGTAACGAT CGGCGATAAC AGCATCATCG GCGCAGGTGC CGTGGTGACG CGGGACATTC CGGCGAACTG CATTGCGGCG GGAAATCCCG CCCGCGTGGT GCGGGAACTC GATCCTGCGC GCGACTTCCG CAAGCGGGAA GTGCTTTTCG CCGACAACAA TCTCGAACGC GATATGGACA GGCTGATGCG CTACATGCTG CGCGAGAACA CGCTCTTCGG ATGGCTCCGG AGCGTGTTCT CGCCTTCGCG CATGGACTAG
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Protein sequence | MRRDRRPYFI RRIIDGWTRF QVQHFIVPAF DAVGPGLDIT SPRNLEIWGG GIRAGSHLHL HAAEGNLVRL ATWRTGDREG RITIGDYVLI SPGTHIVASD EITIGSNTMI ASGCYISDSD WHDTYDRTAE LDKHRPIRIG ENVWLGVRAI IGKGVTIGDN SIIGAGAVVT RDIPANCIAA GNPARVVREL DPARDFRKRE VLFADNNLER DMDRLMRYML RENTLFGWLR SVFSPSRMD
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