Gene Plav_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3071 
Symbol 
ID5455583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3279248 
End bp3280756 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content56% 
IMG OID640878660 
Productmembrane bound O-acyl transferase MBOAT family protein 
Protein accessionYP_001414335 
Protein GI154253511 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1696] Predicted membrane protein involved in D-alanine export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.218692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.871796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGTTCA ACTCACCCAT CTTTCTCTTT GGCTTTCTGC CACTGACAGC TTTGCTGTGC 
TTCCTCATCC GCGCCTATAT GGGCCGGGAG GCAAGCCTTG GCTTTCTGGT TTTGGCCTCT
CTCTTCTTTT ACGGCTGGTG GAACCCGGTC TATCTGCCGC TGCTGATCGG CCTCGCGATC
TTCAATTTTC TGATGGCGAA GGCCATCATG ACCGAGCGGC TCAAGCCCGG CGGCGGGACA
GCGACCGTCC TCACGGCCTT CGGAGTGACG GTCGATCTCG CTTCACTCGG GTTTTTCAAA
TACACGGATT TTTTGATCGG AACGTCCAAC GCGGTGCTCG ATACGGATTT TCCGCTTCAG
CACATCGTTC TGCCGTTGGC CATATCCTTC TTCACCTTCC AGAAGATTGC CTATCTGGTG
GATGCTCGGC GAGGCGAGGT CGAGCCCCAC AGCTTTCTTG AATATTGTTT CTTCGTGATG
TTCTTTCCCC AGCTCATTGC GGGGCCGATT GTGCATCACA AGGAAATATT CTCGCAGACC
AAGAAGGCCC GCGGCTTCGC CTTCGACAGA ATGAACATCG CTATCGGCCT CACGATCTTC
TTTATCGGGC TCTTCAAGAA GGTTGTACTC GCGGACAATA TCGCGCCGGT TGCGACCGCT
GTCTTCAACA GTGCAGCGGC CGGCAACGAG ATAGGTTTCT TCGACGCATG GGAGGGAATG
CTTGCCTATA CCTTCCAGCT CTATTTCGAT TTTTCCGGCT ATTCGGACAT GGCAATCGGC
GCCGCGCGCA TATTCGGCAT CAAGCTTCCG CTGAATTTCC ATTCGCCGTA CCAGGCTGTC
AGCATCACGG ATTTCTGGCG GCGCTGGCAT ATGACGCTGT CGCGTTTCCT GCGTGACTAC
CTCTACATCT CGCTCGGGGG CAACCGGCGT GGCAAGGTGA GGCGCTATCT CAATCTGTTT
ATCACCATGG CGCTTGGAGG GCTCTGGCAT GGCCCCGCAT GGACATTCAT GCTCTGGGGT
GCGGCGCACG GGCTGATGCT CATCGTCAAT CATGGCTGGA ACGCGCTGCC ACGAAAGCCG
ATCAATACCT GGTGGTCGCG CGGCATTGCG CGCGCCTTGA CGTTTCTGTG TGTCGCGCTT
GCCTGGGTTC TTTTCCGTGC AGCGGACCTT GATGCCGCGA CCGCGATTTA CAGCGGGCTG
GTCACATTCC CGTTTGAATT CACGGCTGAA CGCGTGATCG AGAATATCGC CTGGCTCGCT
TTCTGGATGG GTATCGTCTG GTTCTGGCCG AATACGCAGC AATGGTTGGC TATGGTGCGG
CCCGCTTTCA ACTACAAATG GGCGGATCGC CGCGCCGATC CTTTGTTGCT TCCGATCGAC
GGCACACGCT TTGCGCGTCT GGCGCTTTGG CGGCCAAGCA AAAGGGTAGC CATAGCCGTC
GGACTTATGA CTGCGGCCTC ATTCCTGAGC CTTCAGCGCA TCAGCGAATT CCTCTATTTC
CAGTTCTGA
 
Protein sequence
MLFNSPIFLF GFLPLTALLC FLIRAYMGRE ASLGFLVLAS LFFYGWWNPV YLPLLIGLAI 
FNFLMAKAIM TERLKPGGGT ATVLTAFGVT VDLASLGFFK YTDFLIGTSN AVLDTDFPLQ
HIVLPLAISF FTFQKIAYLV DARRGEVEPH SFLEYCFFVM FFPQLIAGPI VHHKEIFSQT
KKARGFAFDR MNIAIGLTIF FIGLFKKVVL ADNIAPVATA VFNSAAAGNE IGFFDAWEGM
LAYTFQLYFD FSGYSDMAIG AARIFGIKLP LNFHSPYQAV SITDFWRRWH MTLSRFLRDY
LYISLGGNRR GKVRRYLNLF ITMALGGLWH GPAWTFMLWG AAHGLMLIVN HGWNALPRKP
INTWWSRGIA RALTFLCVAL AWVLFRAADL DAATAIYSGL VTFPFEFTAE RVIENIAWLA
FWMGIVWFWP NTQQWLAMVR PAFNYKWADR RADPLLLPID GTRFARLALW RPSKRVAIAV
GLMTAASFLS LQRISEFLYF QF