| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3049 |
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| Symbol | |
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| ID | 5455794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3253018 |
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| End bp | 3255915 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878637 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | YP_001414313 |
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| Protein GI | 154253489 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.288748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGAGC CGCTTTCACA GGCCTTCGCG ACAGCGCCCT CAACGTCAGA AAAACACTTG
TCCGATACGC AAGACAGCGA CATTCCGGGT GACGAGCCAG GCCCGGGCGA CGATACCGGC
ATGGATAGTT TGAACGGTTC GGGCACGCCG CCCGGCGGTC CGGGCGGTCC TTCCGCCGGC
GGTCCGCCGC CCGAGCGCGA CGTCGCTCCC ATCGCCATCG AAGATGAAAT GCGCAGTTCC
TATCTCGATT ACGCGATGAG CGTGATCGTG AGCCGCGCGC TGCCCGATGC GCGGGACGGA
TTGAAGCCCG TGCACCGCCG CATCCTCTTT TCGATGAACG AAAACGGCTA CGACTGGAAC
AAGCCCTATC GCAAGTCGGC CCGCGTCGTC GGTGACGTGA TCGGTAAATA CCATCCGCAT
GGCGACCAGT CGATTTACGA CGCGCTGGTG CGCATGGCGC AGGATTTCTC CATGCGCCTG
CCGCTCTTGG ATGGGCAGGG CAATTTCGGT TCGGTGGACG GCGACCCGCC CGCCGCCATG
CGATACACCG AAGTGCGCAT GGCGAAGACG GCCCATGCGC TGCTCAACGA CATCGACAAG
AACACGATCG ACTTCAAGGA CAATTACGAC GGCACCGAAA GGGAGCCCGT CGTTCTCCCC
GCCGAATTGC CGAACCTTCT CGTCAATGGC GCGAACGGTA TCGCCGTCGG CATGGCGACC
AACATCCCGC CGCATAATCT CGGCGAGGTG ATCGACGCCT GTATCGCGCT GATCGACAAT
CCTGACATCA CGATAGATGA ATTGATCGAG CATGTTCCCG CGCCCGATTT TCCGACCGGC
GGCATCATGC TCGGCCGGCA GGGCGCGCGT CTTGCCTATC ACACGGGCAA GGGCTCGGTC
GTGGTGCGCG GCCGCGTCGA GTTCGAGGAA GTGCGAAAAG ACCGTCAGGC GATCATCATT
TCCGAAATTC CCTATCAGGT GAACAAGGCC TCGATGGTGG AAAAGATCGC CGACCTCGTG
CGCGAGAAGC GCATCGAAGG CATCGCCGAT CTGCGCGACG AGTCCGACCG CAACGGTATG
CGCGTGGTGG TGGAGCTTCG CCGCGATGCC GTGCCGGATG TGGTGCTGAA CCAGCTCTAC
CGGTTCTCGC CGTTGCAGCA GAGCTTCGGC TGCAACATGC TCGCGCTCGA TCACGGGCGT
CCCGAGCTGA TGAACCTGAA GCAGTTCCTC GAAATCTTCG TCGCTTTCCG CGAGGAAGTG
ATTTCACGGC GAACCAAGTT CGAGCTCAAC AAGGCGCGCG ACCGCGCCCA TGTCCTTGTC
GGCCTCGCCA TTGCCGTCGC CAATATCGAT GAGGTCATCA AGCTCATCCG CACCGCGCCA
GACCCGGCAT CGGCCCGCGA AAGTCTGATG GCGCGCGACT GGCCGGCGCG GGACATTGCG
CCGCTGATCG CGCTGATCGA CGATCCGCGC CACCAGTTGC GTGAAGACGG CACCATCCGC
ATGTCGGAGG AGCAGGCCCG CGCCATTCTC GAACTCCGCC TGCAGCGCCT CACCGCGCTT
GGCCGCGATG AAATCGGCGA CGAACTGAAG GGTCTGGGCG AGCGGATCGA GGATTATCTC
TCGATCCTGC GTTCGCGTGC CCGCGTGCTC GACATCATGC GTACCGAGCT GACGGCGATC
AAAGCCGAGT TCGCGACGCC GCGCCGCACC GAGATTGCCG AGTCCGAATC CGATTTCGAG
GATGAAGACC TGATCCAGCG TGAGGACATG GTCGTCACGG TCAGCCATCA GGGCTATATC
AAGCGCGTGC CGCTCTCGAC CTATCGCGCG CAGCGCCGCG GTGGCAAGGG CCGGTCCGGC
ATGTCGACCA AGGACGAGGA TTTCGTCACC CGTCTCTTTG TCGCCAATAC GCATACGCCC
ATGCTCTTCT TCTCGTCCAC GGGCATGGTC TACAAGCTCA AGGTCTGGCG TCTGCCGCAA
TCGACGCCGC AAGCGCGCGG CAAGGCGATG ATCAATATCC TGCCGCTCGA CCACGGCGAA
TACATCACCA CCGTCATGCC GATGCCGGAA GACGAAGCGA GCTGGGACAG CCTCCACGTT
ATGTTCGCCA CCCGCAAGGG CAGCGTTCGC CGCAACAAGC TGTCGGACTT CGTGCAGATC
AACCGCAACG GCAAGATCGC GATGAAGTTC GAAGGCGACG ATGCGGATGA CGCCATTGTC
GGCGTGCAGA TCTGCACGGA GGAAGACGAC GTGCTGCTCA CCGCCGCGAA TGGCCGCTGC
GTCCGCTTCC CCGTTACCGA GGTTCGCGTC TTCTCCAGCC GCAAATCAAC TGGCGTGCGC
GGCATCCGTC TCGGCGATGA CGACAAGCTG ATCGCCATGA GCATCATGCG TCATGTCGAC
GTCACGCCGG CGGAGGCGCG CGCTTACCTG AAGCAGGCCG CCGCCATGCG CCGTGCCGTT
TCCGGCGAGG GCGAGGAGCC GGAAGCCGAA ATCGTCGAGG CGGAAGAGGG CGAAGAGGAA
GCAGCCGAAG AGATGACGCT CTCGACCGAG CGTTATTCCG AGCTTGGCGC CCGCGAGCAG
TTTGTGCTCA CCGTCAGCGA AAAGGGCTTC GGCAAGCGGT CCTCCTCCTA CGACTACCGG
ACGTCGGGCC GCGGCGGCAA GGGCATCATC GCCATGGCCG TCACGCCGCG TAACGGCAAT
CTCGTTGCCT CCTTCCCGGT CGATGTGCAG GACCAGATCA TGCTCGTCAC AGATGCCGGC
CAGCTCATTC GCTGCCCGGT GGACGATGTA CGCGCCGCGG GACGCGCGAC GCAAGGCGTC
ACGATTTTCC GTACCGCGCC GGATGAGCGC GTCGTCTCGG TCGAGCGGGT CGAGGAAACC
GGCTCGGACG AGGAATAG
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| Protein sequence | MREPLSQAFA TAPSTSEKHL SDTQDSDIPG DEPGPGDDTG MDSLNGSGTP PGGPGGPSAG
GPPPERDVAP IAIEDEMRSS YLDYAMSVIV SRALPDARDG LKPVHRRILF SMNENGYDWN
KPYRKSARVV GDVIGKYHPH GDQSIYDALV RMAQDFSMRL PLLDGQGNFG SVDGDPPAAM
RYTEVRMAKT AHALLNDIDK NTIDFKDNYD GTEREPVVLP AELPNLLVNG ANGIAVGMAT
NIPPHNLGEV IDACIALIDN PDITIDELIE HVPAPDFPTG GIMLGRQGAR LAYHTGKGSV
VVRGRVEFEE VRKDRQAIII SEIPYQVNKA SMVEKIADLV REKRIEGIAD LRDESDRNGM
RVVVELRRDA VPDVVLNQLY RFSPLQQSFG CNMLALDHGR PELMNLKQFL EIFVAFREEV
ISRRTKFELN KARDRAHVLV GLAIAVANID EVIKLIRTAP DPASARESLM ARDWPARDIA
PLIALIDDPR HQLREDGTIR MSEEQARAIL ELRLQRLTAL GRDEIGDELK GLGERIEDYL
SILRSRARVL DIMRTELTAI KAEFATPRRT EIAESESDFE DEDLIQREDM VVTVSHQGYI
KRVPLSTYRA QRRGGKGRSG MSTKDEDFVT RLFVANTHTP MLFFSSTGMV YKLKVWRLPQ
STPQARGKAM INILPLDHGE YITTVMPMPE DEASWDSLHV MFATRKGSVR RNKLSDFVQI
NRNGKIAMKF EGDDADDAIV GVQICTEEDD VLLTAANGRC VRFPVTEVRV FSSRKSTGVR
GIRLGDDDKL IAMSIMRHVD VTPAEARAYL KQAAAMRRAV SGEGEEPEAE IVEAEEGEEE
AAEEMTLSTE RYSELGAREQ FVLTVSEKGF GKRSSSYDYR TSGRGGKGII AMAVTPRNGN
LVASFPVDVQ DQIMLVTDAG QLIRCPVDDV RAAGRATQGV TIFRTAPDER VVSVERVEET
GSDEE
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