| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3006 |
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| Symbol | valS |
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| ID | 5456209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3207194 |
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| End bp | 3209923 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878594 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001414270 |
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| Protein GI | 154253446 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.405828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA AGACCTTCGA CCCGCAGGAT GCCGAAGCCC GGCTTTACAA GCTCTGGGAG
GAAAGCGGCG CTTTCCAGGC CGGCGACCCC GCGCGGGTAG AAGCGGGCGC CAAGCCCTAT
TGCATCGTCA TCCCGCCGCC CAACGTCACC GGCAGCCTGC ATATGGGCCA TGCGCTCAAC
AACACGCTGC AGGACGTGCT GATCCGCTTC GAGCGGATGC GCGGCAAGGA CGTGCTCTGG
CAGCCGGGCC TCGACCATGC GGGCATCGCC ACTCAGATGA TCGTCGAGCG CCAGCTTGAA
GGCGAGGGCA ATATCCGCCG CCGCGACATG GGCCGCGATG CCTTCATCGA GCGCATCTGG
AAATGGAAAG GCGAGAGCGG CGGCACCATC ATCGGCCAGC TCCGCCGCCT CGGCGCCTCC
TGCGACTGGA GCCGCGAGCG TTTCACGCTG GACGAAGGTC TGTCGAAAGC CGTGCTGAAA
GTTTTCGTGG AGCTTTACCG CGAAGGCCTC ATCTATCGCG ACAAGCGCCT CGTCAACTGG
CACCCGGAAC TTCAGACCGC CGTCTCCGAT CTCGAAGTCG AGAATATCGA GGTGAAGGGC
CACTTCTGGC ATTTCCGCTA TCCGCTCGCG GATGGCGTCA CCTATGAGTG GCCGCTTTTC
GACGAGGAGG GTAATCCCGC CGGCACCGAA ACGCGCGACT ACATCGTCGT CGCCACCACG
CGCCCCGAAA CGATGCTGGG CGACACCGGT GTCGCCGTGA ACCCGGAAGA CGAGCGTTAC
AAGTCCCTCA TCGGCAAGTT CGTGGAGCTG CCGCTGGTCG GCCGCCGCAT TCCGATCGTC
GGCGACGAAC ACGCGGACCC GGAGCAGGGT TCCGGTGCGG TGAAGATCAC GCCCGCACAT
GACTTCAACG ACTTCGAGGT CGGTAAGCGG CAGGGACTTG AGCAGATCAA CATTCTCAAC
CCCGACGGCA AGCTCAACGA CGAAGTGCCG GAGCCTTATC GCGGCATGGA CCGTTTCAAG
GCGCGCAAGC AGGTCGTCGT TGACATCGAG GCGCTCGGTC TCCTCGACCG CATCGAGGAC
AAGATCGTCA TGGTTCCGCA TGACGAGAAA TCAAAACTGG TCGTCATCGA GCCCTATCTC
ACCGACCAGT GGTATGTCGA CGCGGCGACG CTGGCGAAGC CCGCCATTGA AGCGGTGGAG
CGCGGCCAGA CCGTCTTCGT GCCGAAGAAC TGGGAAAAGA CCTATTTCGA GTGGATGCGC
AACATCCAGC CCTGGTGCAT CTCGCGCCAG CTCTGGTGGG GGCATCGCAT TCCGGCATGG
TATGGGCCGG ACGGTCATGT CTTCGTCGCC TATAGCGATG AAGAGGCCGC CGCCGAAGCG
GAAAAGCACT ACGGCAAAAG CGTCGAACTC ACGCGCGACG AAGACGTGCT CGACACATGG
TTCTCCTCCG GCCTCTGGCC CTTCTCCACG CTCGGCTGGC CGGACAAGAC GCCGGAACTC
GCGCGCTATT ACAAGACCGA CGTGCTCGTC ACCGGCTTCG ACATCATCTT CTTCTGGGTC
GCCCGCATGA TGATGATGGG TCTGCACTTC ATGCAGGAAG TGCCGTTCCA CACCGTCTAT
ATCCATGCGC TGGTCCGCGA CGAGAAGGGC CAGAAGATGT CGAAGACGAA GGGCAACGTC
ATCGACCCGC TGAAACTCAT CGACGAATAC GGCGCCGACG CGCTCCGCTT CACGCTGGCC
GCCATGGCCG CGCAGGGCCG CGACATCAAG CTTGCGACAT CCCGCGTCGA AGGTTACCGC
AATTTCGGCA CCAAGCTCTG GAACGCCGCG CGCTTCTGCG AGATGAACGA ATGCGCCCGC
GTAGAGGGTT TCGATCCCGC GAAGCTCAGC CAGACGGTCA ACAAGTGGAT CGTCGGCGAG
GTTGCGCGCA CCGCCGCCGA AATCACGGAA GCCATCGAAG CCTACCGCTT CAACGACGCG
GCGAACGCGG CCTACAAATT CGTCTGGAAC GTCTTCTGCG ACTGGTATCT CGAATTCATC
AAGCCGCTTT TGATGGGCGA CAATGAGGAA GCGAAAGCCG AAACCCGCGC CACGGCCGCC
TGGGTTCTCG ACCAGATATT GCTGATGCTC CATCCCTTCA TGCCCTTCGT CACCGAAGAG
CTCTGGCAGC GCACGGGCGA AGTTGGCCCG AAGCGCGAGA CGCTGCTCGT CAAGGCGGCA
TGGCCGCTTC ACACAGGGCT CGGCGATGCC GCGGCCGACA AGGAGATGGA TTGGGTGATC
CGCTTCATCA CCGAAATCCG TTCCGTCCGT GCCGAGATGA ATGTGCCGGC GGGCGCCAAG
ATCGCGCTTC TCATCAAGGA TGCGAGCGAG GAAAGCCTCG CGCGCTTCGA GCGTCACCGC
GACCTCATCA TGCGCCTCGC GCGTCTCGAA AGCGCTGTGG TGACGACATC CGTTCCGGAA
GGCGCGCTTC AGCTCGTGCT GGACGAAGCG ACGCTGATCC TGCCGCTCGC AAACCTCATC
GACGTGGCCG CCGAAACCGC GCGTCTCCGC AAGGAACTCG GCAAGCTCGA AGACGAAGTG
AAGAAGATCG ACGCGAAGCT TGGCAACGCC AAATTCTTGG CGGGTGCGCC GGAGCAGGTC
GTCGAGGAGC AGCGCGAACG CAAGGCCGAC GCACAAGCGG CGATGGCGAA GTTCAACGAG
GCGCTGAAGC GGCTCGCGGG CGCTGCCTGA
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| Protein sequence | MLDKTFDPQD AEARLYKLWE ESGAFQAGDP ARVEAGAKPY CIVIPPPNVT GSLHMGHALN
NTLQDVLIRF ERMRGKDVLW QPGLDHAGIA TQMIVERQLE GEGNIRRRDM GRDAFIERIW
KWKGESGGTI IGQLRRLGAS CDWSRERFTL DEGLSKAVLK VFVELYREGL IYRDKRLVNW
HPELQTAVSD LEVENIEVKG HFWHFRYPLA DGVTYEWPLF DEEGNPAGTE TRDYIVVATT
RPETMLGDTG VAVNPEDERY KSLIGKFVEL PLVGRRIPIV GDEHADPEQG SGAVKITPAH
DFNDFEVGKR QGLEQINILN PDGKLNDEVP EPYRGMDRFK ARKQVVVDIE ALGLLDRIED
KIVMVPHDEK SKLVVIEPYL TDQWYVDAAT LAKPAIEAVE RGQTVFVPKN WEKTYFEWMR
NIQPWCISRQ LWWGHRIPAW YGPDGHVFVA YSDEEAAAEA EKHYGKSVEL TRDEDVLDTW
FSSGLWPFST LGWPDKTPEL ARYYKTDVLV TGFDIIFFWV ARMMMMGLHF MQEVPFHTVY
IHALVRDEKG QKMSKTKGNV IDPLKLIDEY GADALRFTLA AMAAQGRDIK LATSRVEGYR
NFGTKLWNAA RFCEMNECAR VEGFDPAKLS QTVNKWIVGE VARTAAEITE AIEAYRFNDA
ANAAYKFVWN VFCDWYLEFI KPLLMGDNEE AKAETRATAA WVLDQILLML HPFMPFVTEE
LWQRTGEVGP KRETLLVKAA WPLHTGLGDA AADKEMDWVI RFITEIRSVR AEMNVPAGAK
IALLIKDASE ESLARFERHR DLIMRLARLE SAVVTTSVPE GALQLVLDEA TLILPLANLI
DVAAETARLR KELGKLEDEV KKIDAKLGNA KFLAGAPEQV VEEQRERKAD AQAAMAKFNE
ALKRLAGAA
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