| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3000 |
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| Symbol | |
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| ID | 5456388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3200630 |
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| End bp | 3201190 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878587 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001414264 |
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| Protein GI | 154253440 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.912736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.44921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCCC GTCTCGCACT CGTCTTGATG GTCATCGGCG CCTTTGCCGC CGGCTGCGCG
GAGCGCGGCC TGATCGCGGA GCGCCCGATC GTCCCGGAAA GCGAAATCTA CCGGCTGGAC
ACGGGCGACC AGCTTCGCGT TGTGGTGTTC GGACAGAGCG ACCTCAGCGG CGATTTCACG
GTCGACGGTA CGGGCGCGAT CTCGATGCCC TTGCTGCCGC CGCTTGTTGC GCGGGGAATG
ACGACGGATG AGTTCGAGCG TGCCGTTGCG GACGAACTAG GCGCAAAACT GCTGCGCAAC
CCGAATGTCA GCGTCCAGGT CACGCAGTTC CGGCCCTTCT TCATTCTCGG CGAGGTTCAG
CGCGCCGGGC AATATCCCTT TGTAAACGGC ATGACGGTGC AGAGCGCCGC GGCCATTGCC
GGCGGCTTCA CCTATCGGGC GGATGCCGAC CGGGTGAAGA TCACCCGCAA CCGGGGCGAC
CGTATCGTCG AACTCGGCGT CGACAGCAAT GCGCCGGTAA TGCCGGGAGA TACGATCCTT
GTGAAGGAGC GCTATTTCTG A
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| Protein sequence | MNARLALVLM VIGAFAAGCA ERGLIAERPI VPESEIYRLD TGDQLRVVVF GQSDLSGDFT
VDGTGAISMP LLPPLVARGM TTDEFERAVA DELGAKLLRN PNVSVQVTQF RPFFILGEVQ
RAGQYPFVNG MTVQSAAAIA GGFTYRADAD RVKITRNRGD RIVELGVDSN APVMPGDTIL
VKERYF
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