| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2974 |
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| Symbol | |
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| ID | 5456596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3170737 |
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| End bp | 3171336 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640878558 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001414238 |
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| Protein GI | 154253414 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.42307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGGCCAA TATTTGAGGC CAAACCTTTG TTGACTGACC GGATGTCTAT CGTGGTGGGG
ATGGAAGAGC GTTTAGAAAG TGCGACGGAT CCCGTCGACG TGTCTTTCGA GATCACAGGC
GTCGTTAAAT GGTTTGATGC GGTCAAGGGG TACGGCTTCA TCATTCCGGA AAACGGCGGG
GACGATGTAC TTGTACATTT GTCCTGCCTG AAGCAGGCCG GGCTCGAAGC GCTGGACGAG
GGAACGACCG TTACCTGTGA GGCCGTACGA CGGCCCAAGG GCGCCCAGGC TATTCGTGTC
GTCGATGTCG ATGATACGAC CGCAATCAAA CCAACATCTG GAAGCGCGCG TGCGGCGAGC
CGCTCGCCAG TCGCAGGCGT CGTACCCATC GGCGATTTCG AGGTCGCGAT CGTGAAGTGG
TTCAACCGCG CGCGTGGCTA TGGTTTCGTA ACGCGGGGTG AGGGCACGCC GGATATTTTC
ATTCATATGG AGACGTTGCG CCGCTACGGC ATTCGCGACT TGTTGCCCGG CCAGCAGATA
AATGTGCGGT TCGGCGAGGG CCCAAAAGGG CTCATGGTGG CGGAAATCGC GCCGGAATAA
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| Protein sequence | MRPIFEAKPL LTDRMSIVVG MEERLESATD PVDVSFEITG VVKWFDAVKG YGFIIPENGG
DDVLVHLSCL KQAGLEALDE GTTVTCEAVR RPKGAQAIRV VDVDDTTAIK PTSGSARAAS
RSPVAGVVPI GDFEVAIVKW FNRARGYGFV TRGEGTPDIF IHMETLRRYG IRDLLPGQQI
NVRFGEGPKG LMVAEIAPE
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