Gene Plav_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2963 
Symbol 
ID5456607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3162132 
End bp3162782 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID640878547 
Productcarbon monoxide dehydrogenase subunit G 
Protein accessionYP_001414227 
Protein GI154253403 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.748718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0394978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGT CCGGTGAATA CAAGATTCCG GCGCCGCGAG AGGAAGTCTG GGCCGCGCTC 
AACGATCCTG AAGTTCTGCG CAAGTCCATC CCCGGCGCGG AATCCGTAAA CAAGACCGCT
GACGATGAAT TCGAAGCTGT CGCCAAGGCC AAGGTCGGCC CCGTCAGCGC CCGCTTCAAG
GGCAAGGTCA AGCTCACCGA CATCGACCCG CCGAACGGCT ACACCATTTC CGGCGAAGGC
AATGGCGGCG CGGCGGGCTT CGCCAAGGGT TCGGCCAAGG TATCGCTCAC CGACGCGGAA
GGTGGCGGCA CCCTCCTTTC CTATTCCGTC ACGGCCCAGG TCGGCGGCAA GCTCGCCCAG
ATCGGCCAGC GCTTCATCGA TTCCACAGCC GCCCGCATGT CGGAGGAATT TTTCGACAAT
TTCTCCCGCC TCGCCGGCGG CAGCAAGGTT CAGCCGATGG ACGAAAAACC CGAACTCATC
GACGAAATGG AACATGGTAT TCCGACGAAA TCGCCGGACC GCGATGCCAT CTCGCCGACC
GGCGTCCCCC TTGTTCCGGA CGAGGAAGCG GGCATGAGCT TCTCGCCCTG GCTCTGGGGT
CCACTGGTGA TAATCGCTCT CATTGCAATC GTCTGGCTCG TCGGCTTTTA G
 
Protein sequence
MEMSGEYKIP APREEVWAAL NDPEVLRKSI PGAESVNKTA DDEFEAVAKA KVGPVSARFK 
GKVKLTDIDP PNGYTISGEG NGGAAGFAKG SAKVSLTDAE GGGTLLSYSV TAQVGGKLAQ
IGQRFIDSTA ARMSEEFFDN FSRLAGGSKV QPMDEKPELI DEMEHGIPTK SPDRDAISPT
GVPLVPDEEA GMSFSPWLWG PLVIIALIAI VWLVGF