Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2925 |
Symbol | |
ID | 5455949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3125507 |
End bp | 3125974 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878507 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001414189 |
Protein GI | 154253365 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00455933 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00151967 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTCTACAC AAAAGTCACC GGATGCGTTT CGGACCATCA GCGAGGTTGC GACCGAGCTG GATGTGCCGC AGCACGTGCT GCGCTTCTGG GAGAGCAAGT TCAACCAGAT CAGGCCGCTG AAGCGCGGTG GCGGGCGGCG CTATTACCGG CCCGAGGATG TGGACCTGCT GAGGGGCGTC CGGACGCTGC TCTACAATGA CGGCTACACG ATCAAGGGCG TCCAGAAAGT CTTTCGGGAA CAAGGCGTTA AGTTCGTCGC GGAGACCGGC AGGGGCACTG TCGACACGTC GCTCGCGGAG CTGGCGCGCG AGGCCGTGCA GCGCGGCGAG CAGGAAGAAC GGGAAGAGCC CGGAAAACCT ATCGGAATGA GCGGCCGCAA GCGGCTGGAA GAGCTGCTGG AAGACCTGGT GTCGCTGAAG GACGAGATCG ACGAGACGCT CTGGGAGAGC GAAGAGGAGG AAGGCTGA
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Protein sequence | MSTQKSPDAF RTISEVATEL DVPQHVLRFW ESKFNQIRPL KRGGGRRYYR PEDVDLLRGV RTLLYNDGYT IKGVQKVFRE QGVKFVAETG RGTVDTSLAE LAREAVQRGE QEEREEPGKP IGMSGRKRLE ELLEDLVSLK DEIDETLWES EEEEG
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