| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2912 |
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| Symbol | |
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| ID | 5456796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3112835 |
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| End bp | 3113983 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878494 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_001414176 |
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| Protein GI | 154253352 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0036072 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.00293251 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTACAAGG AATATCTCTC CCCGATAGAA GACGTCATCG AGGACGCCCG GAATGGCAAG
ATGTTCATTC TTGTCGATGC GGAGGATCGC GAGAACGAAG GCGACCTCGT CATCCCGGCG
CAGATGTGCA CGCCGGAAGC CGTCAACTTC ATGGCGAAGT ACGGACGAGG GCTCATATGC
CTGACGTTGA CAAATGATCG TGCGAAGCAG CTCAACCTGC AGTTGATGTC ATCAACCAAC
CAATCGCGTC ATCAGACAGC GTTCACGGTG TCGATCGAGG CGCGGGAGGG AATTTCGACC
GGCATCTCCG CGCATGACCG TGCGCATACC GTTTCCGTCG CCATCGATCC GACCAAGGGC
GCCACCGATA TCGTTTCCCC GGGCCATGTG TTTCCGCTTG TTGCGCGCGA CGGAGGCGTG
CTGGTACGGG CGGGACATAC GGAGTCGGCG GTCGATATCG CACGCCTTGC GGGGCTTTAT
CCCGCCGGCG TCATTTGCGA AATCATGAAT GACGATGGAA CGATGGCGCG GCTGCCGGAC
CTCGTGCAGT TCGCGCAGTT GCACGGGCTG AAGATCGCGA CCATCGCGGA CCTCATCGCC
TATCGTCGCC GATATGACAA TTTTATCCAC CGGGCGATCG AAACCGAACT CGACAGCGAG
TATGGCGGCG AGTTCAAGCT CATGGTCTAT CTCAATACCG TCGAATACGC GGAGCACATT
GCGCTTGTAA AAGGCGATAT TTCCGGGCCG GAGCCTGTAC TGGTACGCGT TCACGCGATC
AATGTCTTTG ACGATATTCT GGGGGCGACC GGGCCGCGCT CGGACGTGCT GAAGGAGTCG
ATGCGCATCA TTGCCGAGGA GGGCCGTGGC GTGATCGTGC TGATCCGCGA TACAACCGCG
ACCGTCGTTT CCGACATGCT CCTGAGAAAG GGAGAAGGCG GAGAACAAGG AATGCCCCGG
CGGCTTCGAG AGTATGGCGT AGGCGCGCAA ATTTTGCTCG ATCTCGGCGT TCATGACATG
GTGCTGCTGT CGGATACGGA TCGGAGCATT GTCGGCCTCG ACGGGTATGG CCTTCGGGTT
ACGGGGCAAC GTCCTATTAC CAAAGCCGGC AATGCGAAGG CCGCTCGCGC CAAGGAGACC
ACCTCGTGA
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| Protein sequence | MYKEYLSPIE DVIEDARNGK MFILVDAEDR ENEGDLVIPA QMCTPEAVNF MAKYGRGLIC
LTLTNDRAKQ LNLQLMSSTN QSRHQTAFTV SIEAREGIST GISAHDRAHT VSVAIDPTKG
ATDIVSPGHV FPLVARDGGV LVRAGHTESA VDIARLAGLY PAGVICEIMN DDGTMARLPD
LVQFAQLHGL KIATIADLIA YRRRYDNFIH RAIETELDSE YGGEFKLMVY LNTVEYAEHI
ALVKGDISGP EPVLVRVHAI NVFDDILGAT GPRSDVLKES MRIIAEEGRG VIVLIRDTTA
TVVSDMLLRK GEGGEQGMPR RLREYGVGAQ ILLDLGVHDM VLLSDTDRSI VGLDGYGLRV
TGQRPITKAG NAKAARAKET TS
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