| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2834 |
|---|
| Symbol | |
|---|
| ID | 5455813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3038603 |
|---|
| End bp | 3039247 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640878415 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001414098 |
|---|
| Protein GI | 154253274 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0344] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCG AAATCGATCT CATGGCAGCC ACGCCGTTGC TGCTTGTCGT CCTTGCGCTC
GGCTACCTGC TGGGCTCCAT CCCCTTCGGC CTGTTGCTCA CAAAAGCCGC CGGCCTCGGC
GACATCCGCG ACATCGGCTC CGGCAATATC GGCGCGACCA ATGCCCTGCG CACCGGCAAC
CGCTGGGTCG CCATCGGCAC ATTGATCGGC GACGCTGCCA AGGGCGCCGT CGCCGTCCTC
ATCGCAGGCG TCCTCGCCTC ACGCACCGGC GGCGACGCAA CATGGATGAT GAGCCTCGCA
GCACTTGGCG CCTTCCTCGG CCACCTCTTT CCCGTCTGGC TCGGTTTCAA GGGCGGCAAG
GGCGTGTCGA CCTTCATCGG CATCCTGCTT GCCCTTTACT GGCCGGTCGG CCTTCTCTTC
TGCGCCACCT GGGCCATTGT CGCCGCCGTC GCGCGCTACT CCTCGCTCTC CGCCCTCGTC
GCCGCCCTGC TCACGCCCGT CTATCTCGCC TGGCTCGATC AGTGGCATCT CGTCGGCCTC
GGCGTCCTGC TGGTCATCCT CATCTACATC GCGCACCGCG ATAACATCTC GCGCCTCCTC
TCCGGCACGG AGTCGCGCAT CGGCCAGAAG AAAACCGAGG CCTGA
|
|---|
| Protein sequence | MPTEIDLMAA TPLLLVVLAL GYLLGSIPFG LLLTKAAGLG DIRDIGSGNI GATNALRTGN
RWVAIGTLIG DAAKGAVAVL IAGVLASRTG GDATWMMSLA ALGAFLGHLF PVWLGFKGGK
GVSTFIGILL ALYWPVGLLF CATWAIVAAV ARYSSLSALV AALLTPVYLA WLDQWHLVGL
GVLLVILIYI AHRDNISRLL SGTESRIGQK KTEA
|
|---|
| |