Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2806 |
Symbol | |
ID | 5454153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3010100 |
End bp | 3010978 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878388 |
Product | hypothetical protein |
Protein accession | YP_001414071 |
Protein GI | 154253247 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.232459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.401097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA TCGCGCTGGC CGCCGCTCTT TTTGCGCTTT CCGCCTGCGA TTCCAAGCCC TTGCGCGATT GCGAAGACTG CCCGGCGCTC GTTTTGCTTA AGCCCGGAAG CTTCATGCGC GGCAGCCTCG AAAGCGATCC GGCTGCGGAC GAAGCCGAGT TCCCGCGCCA TGAAGTCCGC ATCCTCCGTC CTTTCGCCAT GGCCGCCACC GCCGTAACCG TCGCCGAATT CGCGGCCTTC ATCGCCGCGA CGAGCCACAC CCCGGAAAAC GGCTGTCACA CCCTCACCGC CGACGGCTGG CGCCTCGATC CCGAGGCAAA CTGGCGCAAT CCGGGCTTTC CTCAAGGCCC GTCGCACCCC GTCGTCTGCC TCTCCTGGCA CGACGCCACG GCCTACGCCG CCTGGATGTC TGAAAAAACC GGGAAAAACT ACCGCCTGCC AAACGAAGCC GAATGGGAAT ACGCCGCCCG CGGCGGCACC GCCGGCACGA ATTTCTGGGG CGAAGACGAC CGCCTCGCTT GCGACTACGC CAACGTCAAC GACCTCACCG CCAAGAACAA GGTCGCAAAA GTCGCGGAGC CCTGCACCGA CGGCTTCCTG CACACGAGCC CCGTCGCAAG TTTCCGGCCC AATCCTGCGG GCCTTTACGA CATGGTGGGC AACGCTTGGG TATGGCTTTC CGATTGCTGG CTCGGCGACT ACAAGCTCGG TCCGCGCGAC GGCACGCCGG CCACCGCCGT AAACTGCCAG ATCCGCGCCC TTCGCGGCGG TTCATGGACA GATACGCCAG GGCCGGTCCG CATCGCGGCT CGCGAAAGCC GGCTTGCGGG GGAGCGTCTG GCGATAGCCG GTTTCCGCCT CGCCAGAGAT GCCGACTAG
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Protein sequence | MIRIALAAAL FALSACDSKP LRDCEDCPAL VLLKPGSFMR GSLESDPAAD EAEFPRHEVR ILRPFAMAAT AVTVAEFAAF IAATSHTPEN GCHTLTADGW RLDPEANWRN PGFPQGPSHP VVCLSWHDAT AYAAWMSEKT GKNYRLPNEA EWEYAARGGT AGTNFWGEDD RLACDYANVN DLTAKNKVAK VAEPCTDGFL HTSPVASFRP NPAGLYDMVG NAWVWLSDCW LGDYKLGPRD GTPATAVNCQ IRALRGGSWT DTPGPVRIAA RESRLAGERL AIAGFRLARD AD
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