Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2788 |
Symbol | |
ID | 5456198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2989066 |
End bp | 2991087 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878370 |
Product | carbamoyl-phosphate synthase L chain ATP-binding |
Protein accession | YP_001414053 |
Protein GI | 154253229 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.683073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.298513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAT CCCTCCTGAT CGCCAATCGC GGCGAAATTG CCGTTCGTAT CATCCGCACC GCACGGCGCA TGGGCCTCAA GACCATCGCC GTCTATTCGG ATGCCGATGC CAATGCCTAT CATGTGGCGG AGGCCGACGA GGCCTATCGG ATCGGACCGG CGCCTGCTGC GGAGAGCTAT CTGCGTATCG ACGCCATTCT CGATGCCTGC GCGCGCTCCA GCGCGGAAGC GGTGCATCCG GGCTATGGTT TTCTCTCCGA GAATGCGGGT TTTGCCGAAG CCTGCGAGAA GGCGGGGCTG ATATTTGTAG GGCCGCCTGC CAGCGCGATC CGCGCGATGG GATTGAAGGA CGCCGCCAAG GCGTTGATGG AAAAGGCCGA TGTGCCCATT GTCCCCGGTT ATCACGGGGA TAACCAGGAC GCGGATTTCC TCGGCGAGCA GGCGGAGAAG ATCGGCTATC CCGTTCTCAT CAAAGCCGTA GCCGGCGGTG GTGGCAAGGG GATGCGCCGC GTCGACGATC CGGCCTCCTT TGCCAAAGAA CTCAAGAGCG CGCAGCGGGA AGCCGGTTCT GCCTTCGGCG ACGAGCGCGT GCTGGTCGAG AAATATGTAG CCCGTCCGCG TCATATCGAA ATTCAGGTCT TTGCCGACAG CCACGGGCAG GCGGTATCGC TCCATGAGCG GGACTGCTCG TTGCAGCGGC GGCACCAGAA GGTGATCGAG GAAGCGCCGG CCCCCGGCAT GCCGCCCGAA ATGCGCAAGG CGATGGGCGA AGCGGCGGTC GCTGCCGCGA AGGCCATTGG CTATCGCGGC GCGGGAACGG TGGAATTCAT CGCCGATGCT TCGGATGGGC TGAAGCCCGA CGGCTTCTGG TTCATGGAGA TGAACACGCG GCTGCAGGTC GAACATCCCG TGACGGAAGC GATCACGGGG CTCGACCTCG TGGAATGGCA GCTCCGCGTC GCAGGCGGCG AGCATCTGCC GCTGACGCAA GACAAGATAC CGCTGAAGGG ACATGCGGTG GAGGTGCGTC TCTACGCGGA AGACCCGGCG AAGAAATTCT TCCCATCCAC GGGCCGGCTG CTGCGGCTTC GCGCGCCGGA GAACATGCCG CATGTCCGCA CGGATATGGG CGTGCGCGAG GGCGATGAAG TCAGCATGTT CTACGACCCG ATGATCGGCA AGATCATCGC GCATGGCGAG ACGCGGCGGA TTGCGCTCAG AACGCTCCGG GGATTTCTTT CGCGCATGGA AGTGGCGGGG CCGAAGACCA ACCTCGCGTT TCTCGCGGCC GCGATGGCGC ATGAATCCTT CATTGCCGGT GATATCGACA CGGGTTTCAT CGACAGGCAT CTGGACCAGT TGGTGCCGAA AGGTCCGGTG GAGCCGTGTG TGCTTGCGGT GGGGGCGGCG GCACATCTCA TCGGGCGAAG TGCTGTCTTG CGTGCCGCGC AGGCCGGAAG CGACGAGCCG CATTCTCCGT GGGCCGAAGC GGACGGTTGG GTGCTGGGGG GGCACCGTGC CGAAACGCTG CGATTCATCG TGGGCGGCGA AAATGTGTCG CTGACTGTTG CTCCGGAAGG AAATGGCTGG CGGCTCTCGG GCGAAATGGT CGGTGCGAAT ATCGCCGTCA GCGCCATAAT GGACGGGGAT GGAACCATCA GCGCCACGGT CGACGGCGTC AGGCTGAAGG CTGCCTGTGT GCCGAGCGGG CGCGGATTTA TTCTTGTCCA TGAAGGGATA TCGACCGATT TTTCGATAGT GGATCCGCTC GATGTCGATA TCGTATCGGA CGCGGATACA GGCTCGCTGA AGTCGCCGAT GCCGGGCAAA ATCGTGCAGG TATTGGTGGA GCCGGGCGCC AGAATCCGCA AAGGTGCCGC GCTCGTCGTG ATGGAAGCCA TGAAAATGGA ACAGACGCTG ACGGCGGCGG TCGACTCGGT CGTGGCGGCC GTCCATGTCG GCATTGGCGA TCAGGTCGAA GCGGGTGCAA CGCTTGTCGC TTTCGAGGAG AAGCCGGGGT GA
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Protein sequence | MFKSLLIANR GEIAVRIIRT ARRMGLKTIA VYSDADANAY HVAEADEAYR IGPAPAAESY LRIDAILDAC ARSSAEAVHP GYGFLSENAG FAEACEKAGL IFVGPPASAI RAMGLKDAAK ALMEKADVPI VPGYHGDNQD ADFLGEQAEK IGYPVLIKAV AGGGGKGMRR VDDPASFAKE LKSAQREAGS AFGDERVLVE KYVARPRHIE IQVFADSHGQ AVSLHERDCS LQRRHQKVIE EAPAPGMPPE MRKAMGEAAV AAAKAIGYRG AGTVEFIADA SDGLKPDGFW FMEMNTRLQV EHPVTEAITG LDLVEWQLRV AGGEHLPLTQ DKIPLKGHAV EVRLYAEDPA KKFFPSTGRL LRLRAPENMP HVRTDMGVRE GDEVSMFYDP MIGKIIAHGE TRRIALRTLR GFLSRMEVAG PKTNLAFLAA AMAHESFIAG DIDTGFIDRH LDQLVPKGPV EPCVLAVGAA AHLIGRSAVL RAAQAGSDEP HSPWAEADGW VLGGHRAETL RFIVGGENVS LTVAPEGNGW RLSGEMVGAN IAVSAIMDGD GTISATVDGV RLKAACVPSG RGFILVHEGI STDFSIVDPL DVDIVSDADT GSLKSPMPGK IVQVLVEPGA RIRKGAALVV MEAMKMEQTL TAAVDSVVAA VHVGIGDQVE AGATLVAFEE KPG
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