| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2760 |
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| Symbol | |
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| ID | 5456892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2959238 |
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| End bp | 2960311 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878341 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001414025 |
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| Protein GI | 154253201 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.935072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.155629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCG CCCGGGGCGC TTTCAAGCGT CCCGCAAACG ACGACGAGGT ACTTAAATTG
ATCCAGAAGA ACTGGGAAGA GCTGATCAAA CCGAACAAGC TCGAAATCAA TCCGGGCCAT
GACGCGCAGC GTTTCGCGAC GGTCGTGGCA GAGCCGCTTG AGCGGGGCTT CGGCCTGACG
CTTGGCAATG CGCTGCGTCG CGTGCTGATG TCGTCGCTGC AGGGCGCGGC CGTCACCGCC
GTGCAGATCG ACGGTGTGCT GCACGAGTTC TCCTCGATTG CCGGTGTGCG CGAGGACGTG
ACGGACATCA TCCTGAACAT CAAGCAGCTT GCGCTGCGCC TTCATGCCGA AGGCCCGAAG
CGCATGTCGC TGTCGAAGAA GGGCCCCGGC GTCGTTACCG CCGGCGATAT CACCGCCGGT
GCGGATATCG AAGTGCTGAA CCCCGATCTC GTTCTCTGCA CGCTCGACGA GGGCGCCGAG
ATCCGCATGG AATTCACGGT CGCGCTCGGC AAGGGTTATG TCGCGTCGGA TCGCAACCGT
CCTGAAGATG CGCCGATCGG CCTGATGCCG GTCGACAGCC TCTACAGCCC GGTGAAGCGC
GTTTCCTACA AGGTCGAGAA CACCCGTGAG GGCCAGGTTC TCGACTATGA CAAGCTCACG
CTGCAGATCG AGACCAACGG CGCGATCACG CCGGACGATG CCGTCGCCTA TGCCGCGCGC
ATCCTGCAGG ACCAGCTCCA GACCTTCGTG AATTTCGAAG AGCCCGAGCA GAAGCATGTC
GAGGAGAGCC GTCCGGAACT CGAGTTCAAT GCCGCGCTCC TGAAGAAGGT GGACGAGCTC
GAACTCTCCG TTCGGTCGGC CAACTGCCTG AAGAACGACA ACATCGTCTA TATCGGCGAC
CTGATCCAGA AGACGGAAAG CGAAATGCTT CGCACTCCGA ACTTCGGCCG CAAGTCGCTG
AACGAGATCA AGGAAGTTCT CGCCCAGATG GGTCTCCATC TCGGTATGGA AGTTCCGAAC
TGGCCGCCGG AGAATATCGA AGAACTGGCG AAGCGGTACG AAGATCAGTA TTGA
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| Protein sequence | MSPARGAFKR PANDDEVLKL IQKNWEELIK PNKLEINPGH DAQRFATVVA EPLERGFGLT
LGNALRRVLM SSLQGAAVTA VQIDGVLHEF SSIAGVREDV TDIILNIKQL ALRLHAEGPK
RMSLSKKGPG VVTAGDITAG ADIEVLNPDL VLCTLDEGAE IRMEFTVALG KGYVASDRNR
PEDAPIGLMP VDSLYSPVKR VSYKVENTRE GQVLDYDKLT LQIETNGAIT PDDAVAYAAR
ILQDQLQTFV NFEEPEQKHV EESRPELEFN AALLKKVDEL ELSVRSANCL KNDNIVYIGD
LIQKTESEML RTPNFGRKSL NEIKEVLAQM GLHLGMEVPN WPPENIEELA KRYEDQY
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