Gene Plav_2756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2756 
Symbol 
ID5453371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2956222 
End bp2957553 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content62% 
IMG OID640878337 
Productpreprotein translocase, SecY subunit 
Protein accessionYP_001414021 
Protein GI154253197 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.373135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.477854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAG CGGCTGAACA GCTCGCGGCG AACCTCAACT TCGCGGCCTT CTCGAAGGCG 
ACCGAGTTGA AGAAGCGCAT CTGGTTCACG CTGGGTGCGC TCATCGTCTA CCGGCTTGGC
ACCTATGTGC CTCTGCCGGG AATCGACCCG TCGGCGCTTG CCCAGGTCTT CAGCCAGCAG
CAGTCCGGCC TGCTCGGCGT CTTTGACATG TTCGCGGGCG GCGCCATCGG CCGCATGGCG
ATCTTCGCGC TGGCGATCAT GCCATACATC TCGGCCTCGA TCATCATCCA GCTGATGACG
ACCGTGTCGC CCCATCTCGC GCAGCTCAAG AAAGAGGGCG AGCAGGGCCG CAAGCAGATC
AACCAGTATA CGCGCTACGG CACGGTGGTT CTGGCCACCC TGCAAGGCTA CGGTATCGCC
GTCGGCCTCG AAGGCGCGCA GAATGTCGTC ATCGATCCGG GCATCTTCTT CCGCATCACC
ACTGTCATCA CGCTGGTCGG CGGTACTGTT TTCCTGATGT GGCTCGGCGA GCAGATCACG
TCGCGCGGCG TCGGCAACGG TATCTCGCTC ATCATCTTCG CCGGCATCGT CGCCGAGCTG
CCTCGCGCGC TCGCGGGCAC GCTGGAACTT GGCCGTCAGG GTGCGCTTTC CACCGCCATC
ATCCTTTTCC TCGCGGTCAT GGTCGTCATT GTCATCATGG CGATTGTCTT TGTGGAGCGG
GCGCAGCGGC GCCTTCTCGT GCAGTATCCC AAGCGCCAGG TCGGCAACAA GCTTTATGGC
GGTGACAGCT CGCATCTGCC GCTGAAGCTC AACACGGCCG GCGTCATCCC GCCGATCTTT
GCCTCGTCGC TGCTGCTGCT GCCGGTGACG ATCGCGAATT TCACGTCGGG GCAGGGGCCT
GACTGGCTCA ACAGCGTCAC GGCGCTGCTC GGCCACGGCC AGCCGCTCTA TATGGCTTTC
TATGCCGCGG GCATCATCTT CTTTGCCTTC TTCTACACGG CCATCGTCTT CAATCCGCAG
GATACGGCCG ACAACCTGAA GAAGTATGGC GGCTTCATTC CGGGCATCCG TCCGGGCCAG
CGCACGGCGG AATATATCGA CTATGTGCTG ACACGGCTCA CAGCCGTCGG TGCGATCTAC
CTGACGATCG TCTGCCTTCT GCCCGAGCTG CTGATCTCTC AATACAGCGT GCCCTTCTAT
TTTGGCGGCA CCTCGCTTCT CATCGTGGTC AGCGTGACGA TGGATACCGT CTCGCAGATA
CAGAGCCACT TGCTGGCGCA TCAGTATGAG GGGCTCATCA AGAAGTCCAA GCTGCGCGGG
GGCAAGCGAT GA
 
Protein sequence
MASAAEQLAA NLNFAAFSKA TELKKRIWFT LGALIVYRLG TYVPLPGIDP SALAQVFSQQ 
QSGLLGVFDM FAGGAIGRMA IFALAIMPYI SASIIIQLMT TVSPHLAQLK KEGEQGRKQI
NQYTRYGTVV LATLQGYGIA VGLEGAQNVV IDPGIFFRIT TVITLVGGTV FLMWLGEQIT
SRGVGNGISL IIFAGIVAEL PRALAGTLEL GRQGALSTAI ILFLAVMVVI VIMAIVFVER
AQRRLLVQYP KRQVGNKLYG GDSSHLPLKL NTAGVIPPIF ASSLLLLPVT IANFTSGQGP
DWLNSVTALL GHGQPLYMAF YAAGIIFFAF FYTAIVFNPQ DTADNLKKYG GFIPGIRPGQ
RTAEYIDYVL TRLTAVGAIY LTIVCLLPEL LISQYSVPFY FGGTSLLIVV SVTMDTVSQI
QSHLLAHQYE GLIKKSKLRG GKR