Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2756 |
Symbol | |
ID | 5453371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2956222 |
End bp | 2957553 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640878337 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_001414021 |
Protein GI | 154253197 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.373135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.477854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCAG CGGCTGAACA GCTCGCGGCG AACCTCAACT TCGCGGCCTT CTCGAAGGCG ACCGAGTTGA AGAAGCGCAT CTGGTTCACG CTGGGTGCGC TCATCGTCTA CCGGCTTGGC ACCTATGTGC CTCTGCCGGG AATCGACCCG TCGGCGCTTG CCCAGGTCTT CAGCCAGCAG CAGTCCGGCC TGCTCGGCGT CTTTGACATG TTCGCGGGCG GCGCCATCGG CCGCATGGCG ATCTTCGCGC TGGCGATCAT GCCATACATC TCGGCCTCGA TCATCATCCA GCTGATGACG ACCGTGTCGC CCCATCTCGC GCAGCTCAAG AAAGAGGGCG AGCAGGGCCG CAAGCAGATC AACCAGTATA CGCGCTACGG CACGGTGGTT CTGGCCACCC TGCAAGGCTA CGGTATCGCC GTCGGCCTCG AAGGCGCGCA GAATGTCGTC ATCGATCCGG GCATCTTCTT CCGCATCACC ACTGTCATCA CGCTGGTCGG CGGTACTGTT TTCCTGATGT GGCTCGGCGA GCAGATCACG TCGCGCGGCG TCGGCAACGG TATCTCGCTC ATCATCTTCG CCGGCATCGT CGCCGAGCTG CCTCGCGCGC TCGCGGGCAC GCTGGAACTT GGCCGTCAGG GTGCGCTTTC CACCGCCATC ATCCTTTTCC TCGCGGTCAT GGTCGTCATT GTCATCATGG CGATTGTCTT TGTGGAGCGG GCGCAGCGGC GCCTTCTCGT GCAGTATCCC AAGCGCCAGG TCGGCAACAA GCTTTATGGC GGTGACAGCT CGCATCTGCC GCTGAAGCTC AACACGGCCG GCGTCATCCC GCCGATCTTT GCCTCGTCGC TGCTGCTGCT GCCGGTGACG ATCGCGAATT TCACGTCGGG GCAGGGGCCT GACTGGCTCA ACAGCGTCAC GGCGCTGCTC GGCCACGGCC AGCCGCTCTA TATGGCTTTC TATGCCGCGG GCATCATCTT CTTTGCCTTC TTCTACACGG CCATCGTCTT CAATCCGCAG GATACGGCCG ACAACCTGAA GAAGTATGGC GGCTTCATTC CGGGCATCCG TCCGGGCCAG CGCACGGCGG AATATATCGA CTATGTGCTG ACACGGCTCA CAGCCGTCGG TGCGATCTAC CTGACGATCG TCTGCCTTCT GCCCGAGCTG CTGATCTCTC AATACAGCGT GCCCTTCTAT TTTGGCGGCA CCTCGCTTCT CATCGTGGTC AGCGTGACGA TGGATACCGT CTCGCAGATA CAGAGCCACT TGCTGGCGCA TCAGTATGAG GGGCTCATCA AGAAGTCCAA GCTGCGCGGG GGCAAGCGAT GA
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Protein sequence | MASAAEQLAA NLNFAAFSKA TELKKRIWFT LGALIVYRLG TYVPLPGIDP SALAQVFSQQ QSGLLGVFDM FAGGAIGRMA IFALAIMPYI SASIIIQLMT TVSPHLAQLK KEGEQGRKQI NQYTRYGTVV LATLQGYGIA VGLEGAQNVV IDPGIFFRIT TVITLVGGTV FLMWLGEQIT SRGVGNGISL IIFAGIVAEL PRALAGTLEL GRQGALSTAI ILFLAVMVVI VIMAIVFVER AQRRLLVQYP KRQVGNKLYG GDSSHLPLKL NTAGVIPPIF ASSLLLLPVT IANFTSGQGP DWLNSVTALL GHGQPLYMAF YAAGIIFFAF FYTAIVFNPQ DTADNLKKYG GFIPGIRPGQ RTAEYIDYVL TRLTAVGAIY LTIVCLLPEL LISQYSVPFY FGGTSLLIVV SVTMDTVSQI QSHLLAHQYE GLIKKSKLRG GKR
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