Gene Plav_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2752 
Symbol 
ID5456787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2954486 
End bp2954842 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content62% 
IMG OID640878333 
Productribosomal protein L18 
Protein accessionYP_001414017 
Protein GI154253193 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.333327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.200711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA TGAAAACACT CTCTCAACGC CGGGCCATGC GCAATCGCGC CAAGCTCGCG 
AAGGCATCAG TCGTCCGTCC GCGCCTTTCG GTGTTCCGGT CGTCCAAGCA TATCTATGCG
CAGGTGATCG ACGATACGCG TGGCGTAACG GTTGCGGCGG CGTCCTCGCT CGACGAGAAG
TTCGGCAAGA AGGCCGGTAC CGACGTTGCA GCGGCGGGCG AGGTCGGCAA GCTTCTCGCC
CAGCGCGCGA AGGATGCCGG TATTACCGAT GTCGTCTTCG ACCGTGGCGG CTACATCTAT
CATGGGCGCG TCAAGGCGCT CGCTGAAGGC GCCCGCGAAG GCGGTCTCAA CTTCTAA
 
Protein sequence
MSNMKTLSQR RAMRNRAKLA KASVVRPRLS VFRSSKHIYA QVIDDTRGVT VAAASSLDEK 
FGKKAGTDVA AAGEVGKLLA QRAKDAGITD VVFDRGGYIY HGRVKALAEG AREGGLNF