Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2734 |
Symbol | |
ID | 5456799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2945395 |
End bp | 2946585 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878315 |
Product | elongation factor Tu |
Protein accession | YP_001413999 |
Protein GI | 154253175 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.102462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAG AGAAGTTTGA GCGGAACAAG CCGCACTGCA ACATCGGGAC GATTGGTCAC GTAGACCATG GCAAGACGTC GCTTACGGCG GCGATCACGA AGGTGCTTGC GGAGACGGGC GGGGCGACGT ATTCGGCCTA TGACCAGATC GACAAGGCGC CTGAAGAGAA GGCGCGCGGG ATCACGATCT CGACGGCGCA TGTGGAGTAT CAGACGGAAG CGCGTCACTA CGCGCATGTC GACTGCCCGG GCCATGCCGA CTATGTGAAG AACATGATCA CGGGCGCGGC GCAGATGGAC GGGGCGATCC TCGTCGTGTC GGCGGCGGAC GGCCCGATGC CGCAGACGCG CGAGCACATC CTGCTCGCCC GCCAGGTCGG CGTGCCGGCG CTTGTGGTGT TCATGAACAA GGTCGACCAG GTCGACGATC CGGAGCTGCT CGAGCTTGTC GAGATGGAAA TCCGCGAGCT TCTTTCGTCT TACGACTTCC CGGGCGACGA TATTCCGATC GTGAAGGGCT CGGCGCTTGC CGCGCTTGAA GACTCGAACA AGGAAATCGG TCACGACGCG ATCCTCGAGC TGATGAAGGC GGTCGACGCC TACATCCCGC AGCCGGAGCG TCCGAAGAAC CTGCCGTTCC TGATGCCGAT CGAAGACGTG TTCTCGATCT CGGGCCGCGG CACGGTTGTG ACGGGCCGTA TCGAGCGCGG TGTCGTGAAG GTCGGCGAGG AAATCGAGAT CGTTGGCATC AAGCCGACGG TGAAGACGAC CTGCACGGGC GTCGAGATGT TCCGCAAGCT GCTCGACCAG GGCGAGGCTG GCGACAATGT GGGCGTTCTC CTGCGCGGCA CGAAGCGTGA AGACGTCGAG CGCGGCCAGG TTCTGTGCGC GCCCGGCTCG ATCACGCCGC ATACGGAGTT CGAGGCGGAA GCCTATATCC TGACGAAGGA AGAGGGTGGC CGTCATACGC CGTTCTTCAC GAACTACCGC CCGCAGTTCT ACTTCCGCAC GACGGACGTG ACGGGCGTGG TGACGCTGCC CGAGGGCACC GAAATGGTGA TGCCGGGCGA CAACGTGAAG ATGAACGTGA CGCTGATCGC CCCCATCGCA ATGGAAGAGA AGCTCCGCTT CGCCATCCGT GAAGGCGGTC GTACCGTCGG CGCAGGCGTC GTCTCGAAAG TGTTGAAGTA A
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Protein sequence | MAKEKFERNK PHCNIGTIGH VDHGKTSLTA AITKVLAETG GATYSAYDQI DKAPEEKARG ITISTAHVEY QTEARHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI LLARQVGVPA LVVFMNKVDQ VDDPELLELV EMEIRELLSS YDFPGDDIPI VKGSALAALE DSNKEIGHDA ILELMKAVDA YIPQPERPKN LPFLMPIEDV FSISGRGTVV TGRIERGVVK VGEEIEIVGI KPTVKTTCTG VEMFRKLLDQ GEAGDNVGVL LRGTKREDVE RGQVLCAPGS ITPHTEFEAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGVVTLPEGT EMVMPGDNVK MNVTLIAPIA MEEKLRFAIR EGGRTVGAGV VSKVLK
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