Gene Plav_2734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2734 
Symbol 
ID5456799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2945395 
End bp2946585 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content63% 
IMG OID640878315 
Productelongation factor Tu 
Protein accessionYP_001413999 
Protein GI154253175 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.102462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG AGAAGTTTGA GCGGAACAAG CCGCACTGCA ACATCGGGAC GATTGGTCAC 
GTAGACCATG GCAAGACGTC GCTTACGGCG GCGATCACGA AGGTGCTTGC GGAGACGGGC
GGGGCGACGT ATTCGGCCTA TGACCAGATC GACAAGGCGC CTGAAGAGAA GGCGCGCGGG
ATCACGATCT CGACGGCGCA TGTGGAGTAT CAGACGGAAG CGCGTCACTA CGCGCATGTC
GACTGCCCGG GCCATGCCGA CTATGTGAAG AACATGATCA CGGGCGCGGC GCAGATGGAC
GGGGCGATCC TCGTCGTGTC GGCGGCGGAC GGCCCGATGC CGCAGACGCG CGAGCACATC
CTGCTCGCCC GCCAGGTCGG CGTGCCGGCG CTTGTGGTGT TCATGAACAA GGTCGACCAG
GTCGACGATC CGGAGCTGCT CGAGCTTGTC GAGATGGAAA TCCGCGAGCT TCTTTCGTCT
TACGACTTCC CGGGCGACGA TATTCCGATC GTGAAGGGCT CGGCGCTTGC CGCGCTTGAA
GACTCGAACA AGGAAATCGG TCACGACGCG ATCCTCGAGC TGATGAAGGC GGTCGACGCC
TACATCCCGC AGCCGGAGCG TCCGAAGAAC CTGCCGTTCC TGATGCCGAT CGAAGACGTG
TTCTCGATCT CGGGCCGCGG CACGGTTGTG ACGGGCCGTA TCGAGCGCGG TGTCGTGAAG
GTCGGCGAGG AAATCGAGAT CGTTGGCATC AAGCCGACGG TGAAGACGAC CTGCACGGGC
GTCGAGATGT TCCGCAAGCT GCTCGACCAG GGCGAGGCTG GCGACAATGT GGGCGTTCTC
CTGCGCGGCA CGAAGCGTGA AGACGTCGAG CGCGGCCAGG TTCTGTGCGC GCCCGGCTCG
ATCACGCCGC ATACGGAGTT CGAGGCGGAA GCCTATATCC TGACGAAGGA AGAGGGTGGC
CGTCATACGC CGTTCTTCAC GAACTACCGC CCGCAGTTCT ACTTCCGCAC GACGGACGTG
ACGGGCGTGG TGACGCTGCC CGAGGGCACC GAAATGGTGA TGCCGGGCGA CAACGTGAAG
ATGAACGTGA CGCTGATCGC CCCCATCGCA ATGGAAGAGA AGCTCCGCTT CGCCATCCGT
GAAGGCGGTC GTACCGTCGG CGCAGGCGTC GTCTCGAAAG TGTTGAAGTA A
 
Protein sequence
MAKEKFERNK PHCNIGTIGH VDHGKTSLTA AITKVLAETG GATYSAYDQI DKAPEEKARG 
ITISTAHVEY QTEARHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPA LVVFMNKVDQ VDDPELLELV EMEIRELLSS YDFPGDDIPI VKGSALAALE
DSNKEIGHDA ILELMKAVDA YIPQPERPKN LPFLMPIEDV FSISGRGTVV TGRIERGVVK
VGEEIEIVGI KPTVKTTCTG VEMFRKLLDQ GEAGDNVGVL LRGTKREDVE RGQVLCAPGS
ITPHTEFEAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGVVTLPEGT EMVMPGDNVK
MNVTLIAPIA MEEKLRFAIR EGGRTVGAGV VSKVLK