Gene Plav_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2727 
Symbol 
ID5455887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2932083 
End bp2932601 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID640878308 
Productribosomal protein L10 
Protein accessionYP_001413992 
Protein GI154253168 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.12165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.845294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAGAG CTGAAAAGTC AGAGCTCGTG ACGCATCTCA ACGGCGTGTT TGCTAACGCC 
GGTGTGGTTG TCGTTGCCCA CTACAGCGGC CTCACCGTGA ACCAGATGTC TGATCTGCGT
TCGCGGATGG CCAAGGCTGG TGCTTCGTTC AAGGTAACGA AGAACCGGCT GGCGAAGCTC
GCTCTGGACG GCACCCCGAT GACGGAGATC GGCGATCTCT TCGCGGGGCC GACGGCAATC
GCCTATTCGC AGGACCCGGT GGCAGCCCCC AAGGTTGCGA TCGAGTTTGC CAAGGAGAAC
CAGAAGCTGG TGATCCTCGG CGGCGCAATG GGCCAGACGG TTCTCGATGC CAAAGCAGTG
AAGCAGCTTG CCGATCTGCC GTCGCTCGAT GAACTGCGCG CGAAGATCGT GGGCATGATC
CAGACCCCGG CCACCCGCAT TGCGGGCGTG CTGCAGGCTC CTGGCGGCCA GCTTGCGCGT
GTCCTGAATG CCTATGCCAC CAAGAGCGAA GCGGCTTGA
 
Protein sequence
MDRAEKSELV THLNGVFANA GVVVVAHYSG LTVNQMSDLR SRMAKAGASF KVTKNRLAKL 
ALDGTPMTEI GDLFAGPTAI AYSQDPVAAP KVAIEFAKEN QKLVILGGAM GQTVLDAKAV
KQLADLPSLD ELRAKIVGMI QTPATRIAGV LQAPGGQLAR VLNAYATKSE AA