Gene Plav_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2724 
Symbol 
ID5454342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2929936 
End bp2930466 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content60% 
IMG OID640878305 
ProductNusG antitermination factor 
Protein accessionYP_001413989 
Protein GI154253165 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0514206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.451833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGC GCTGGTATAT CGTTCACGCC TACTCGAACT TCGAAAAGAA GGTCGCGGAA 
TCTCTGCGTG AGCAGGCCGA GCAGCAGGGC CTCTCGGAGC AGTTCGAGGA AATCCTCGTG
CCGACCGAAG AGGTTGTCGA AGTGCGCCGC GGCCGCAAGA TCAACGCGGA ACGCAAGTTC
TTCCCCGGCT ATGTGCTGGT GAAGGTGGAT CTGACCGACG AGGCTTATCA CCTTGTCAAG
AATACGCCGA AAGTGACGGG CTTTCTCGGC GCGGACAACA AGCCGCAGCC GATCAGCCAG
GCGGAAGTCG ACCGCATCCT GCATCAGGTG CAGGAAGGCG TGGAGCGGCC GAAGCCCTCG
ATCACATTCG AGATCGGCGA GCAGGTTCGC GTGGCGGACG GTCCGTTCGC ATCGTTCAAT
GGTTTCGTCG AGGAAGTCGA CGAAGAGAAG GCACGGCTCA AGGTTGCCGT GTCGATTTTC
GGCCGGGCGA CTCCGGTCGA GCTTGAATAC GCACAGGTCG AGAAGCTCTA G
 
Protein sequence
MAKRWYIVHA YSNFEKKVAE SLREQAEQQG LSEQFEEILV PTEEVVEVRR GRKINAERKF 
FPGYVLVKVD LTDEAYHLVK NTPKVTGFLG ADNKPQPISQ AEVDRILHQV QEGVERPKPS
ITFEIGEQVR VADGPFASFN GFVEEVDEEK ARLKVAVSIF GRATPVELEY AQVEKL