Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2724 |
Symbol | |
ID | 5454342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2929936 |
End bp | 2930466 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640878305 |
Product | NusG antitermination factor |
Protein accession | YP_001413989 |
Protein GI | 154253165 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0514206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.451833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGC GCTGGTATAT CGTTCACGCC TACTCGAACT TCGAAAAGAA GGTCGCGGAA TCTCTGCGTG AGCAGGCCGA GCAGCAGGGC CTCTCGGAGC AGTTCGAGGA AATCCTCGTG CCGACCGAAG AGGTTGTCGA AGTGCGCCGC GGCCGCAAGA TCAACGCGGA ACGCAAGTTC TTCCCCGGCT ATGTGCTGGT GAAGGTGGAT CTGACCGACG AGGCTTATCA CCTTGTCAAG AATACGCCGA AAGTGACGGG CTTTCTCGGC GCGGACAACA AGCCGCAGCC GATCAGCCAG GCGGAAGTCG ACCGCATCCT GCATCAGGTG CAGGAAGGCG TGGAGCGGCC GAAGCCCTCG ATCACATTCG AGATCGGCGA GCAGGTTCGC GTGGCGGACG GTCCGTTCGC ATCGTTCAAT GGTTTCGTCG AGGAAGTCGA CGAAGAGAAG GCACGGCTCA AGGTTGCCGT GTCGATTTTC GGCCGGGCGA CTCCGGTCGA GCTTGAATAC GCACAGGTCG AGAAGCTCTA G
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Protein sequence | MAKRWYIVHA YSNFEKKVAE SLREQAEQQG LSEQFEEILV PTEEVVEVRR GRKINAERKF FPGYVLVKVD LTDEAYHLVK NTPKVTGFLG ADNKPQPISQ AEVDRILHQV QEGVERPKPS ITFEIGEQVR VADGPFASFN GFVEEVDEEK ARLKVAVSIF GRATPVELEY AQVEKL
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